Factsheet for Zm00001d009826_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17778	Sorghum	extracellular, golgi	75.51	64.53
TraesCS1B01G131700.1	Wheat	extracellular	70.75	61.18
TraesCS1A01G111500.1	Wheat	extracellular	70.75	61.18
TraesCS1D01G112900.1	Wheat	extracellular	70.07	60.59
Os05t0165200-00	Rice	extracellular	70.07	60.59
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	59.86	59.46
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	56.46	58.87
GSMUA_Achr11P...	Banana	cytosol, extracellular	55.78	57.34
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	53.74	56.83
Solyc06g007370.1.1	Tomato	extracellular	57.82	53.46
Zm00001d028798_P001	Maize	extracellular, vacuole	56.46	51.55
KRG98199	Soybean	extracellular	57.82	51.52
KRH30160	Soybean	extracellular	58.5	51.5
PGSC0003DMT400052957	Potato	extracellular	57.14	50.91
KRH17122	Soybean	extracellular, golgi	57.14	50.3
Bra030668.1-P	Field mustard	extracellular, golgi	55.78	50.0
CDY15595	Canola	extracellular, golgi	55.78	50.0
CDX86506	Canola	extracellular, golgi	56.46	49.4
KRH72764	Soybean	extracellular	57.14	49.12
CDY10237	Canola	extracellular, golgi	55.78	48.52
Bra015540.1-P	Field mustard	extracellular, golgi	55.78	48.52
CDY02050	Canola	extracellular	52.38	48.12
Zm00001d039735_P001	Maize	extracellular	58.5	48.04
AT1G06980.1	Thale cress	extracellular, golgi	55.1	47.93
CDY09944	Canola	extracellular, golgi	54.42	47.9
CDX97836	Canola	extracellular	52.38	47.83
CDY54890	Canola	extracellular, golgi	54.42	47.34
Bra031549.1-P	Field mustard	extracellular, golgi	53.74	47.31
CDY24020	Canola	extracellular	50.34	46.84
CDX84851	Canola	extracellular	50.34	46.84
CDX84850	Canola	extracellular	50.34	46.84
Bra018326.1-P	Field mustard	extracellular	56.46	46.63
AT2G30230.1	Thale cress	extracellular	54.42	45.2
GSMUA_Achr9P04640_001	Banana	extracellular	46.26	44.74
CDY29687	Canola	extracellular	54.42	44.69
Bra021621.1-P	Field mustard	extracellular	53.06	43.58
Bra022784.1-P	Field mustard	extracellular	51.7	43.18
Zm00001d043024_P001	Maize	extracellular	47.62	41.18
Zm00001d012480_P001	Maize	extracellular	48.3	40.8
Zm00001d038450_P001	Maize	vacuole	45.58	38.07
Zm00001d043399_P001	Maize	extracellular	43.54	32.32
Zm00001d012700_P001	Maize	extracellular	39.46	26.98

Protein Annotations

EnsemblPlants:Zm00001d009826_P001	EnsemblPlants:Zm00001d009826_T001	EnsemblPlantsGene:Zm00001d009826	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26
PFAM:PF14009	ProteinID:AQK92775.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0002210B0F	UniProt:K7UYB1
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:84081260..84081703

Molecular Weight (calculated)

16051.6 Da

IEP (calculated)

9.502

GRAVY (calculated)

-0.178

Length

147 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGRI EEYGRPVAAG EILAANPNHV LSKPCSQGVA VRRILIVSPD SELERGEIYF LIPASSVPPE KKPQPQRQQK
101: SVVLAGSHGN QVVVNKKISS SHRRRRTAGC RTTVWKPHLE CIVEGDT

Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.