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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030668.1-P Field mustard extracellular, golgi 88.41 88.41
CDX86506 Canola extracellular, golgi 79.27 77.38
CDY02050 Canola extracellular 69.51 71.25
CDY10237 Canola extracellular, golgi 72.56 70.41
CDX97836 Canola extracellular 68.9 70.19
CDY24020 Canola extracellular 67.07 69.62
CDY09944 Canola extracellular, golgi 70.12 68.86
CDY54890 Canola extracellular, golgi 70.73 68.64
CDX84851 Canola extracellular 65.85 68.35
CDX84850 Canola extracellular 65.85 68.35
AT1G06980.1 Thale cress extracellular, golgi 70.12 68.05
VIT_06s0004g07460.t01 Wine grape extracellular, golgi 60.37 66.89
CDY29687 Canola extracellular 70.73 64.8
KRH17122 Soybean extracellular, golgi 60.37 59.28
GSMUA_Achr6P32750_001 Banana extracellular, vacuole 50.0 58.16
KRG98199 Soybean extracellular 57.32 56.97
KRH30160 Soybean extracellular 57.93 56.89
GSMUA_Achr5P29500_001 Banana extracellular, vacuole 50.61 56.85
Zm00001d009826_P001 Maize extracellular 50.0 55.78
Solyc06g007370.1.1 Tomato extracellular 53.05 54.72
GSMUA_Achr5P28030_001 Banana cytosol, extracellular 45.73 53.96
GSMUA_Achr11P... Banana cytosol, extracellular 46.95 53.85
KRH72764 Soybean extracellular 56.1 53.8
PGSC0003DMT400052957 Potato extracellular 53.66 53.33
GSMUA_Achr11P... Banana cytosol 51.22 50.6
TraesCS1B01G131700.1 Wheat extracellular 51.83 50.0
TraesCS1A01G111500.1 Wheat extracellular 51.83 50.0
TraesCS1D01G112900.1 Wheat extracellular 51.22 49.41
HORVU4Hr1G055090.1 Barley extracellular 50.61 48.82
TraesCS4D01G190800.1 Wheat extracellular 50.0 48.24
EER95013 Sorghum extracellular, vacuole 48.78 47.9
EES17778 Sorghum extracellular, golgi 50.0 47.67
TraesCS4A01G114800.1 Wheat extracellular 50.0 47.67
TraesCS4B01G189400.1 Wheat extracellular, vacuole 49.39 47.65
Zm00001d028798_P001 Maize extracellular, vacuole 46.34 47.2
Os05t0165200-00 Rice extracellular 48.17 46.47
Os01t0165600-00 Rice extracellular, golgi, mitochondrion, nucleus 47.56 45.88
Os03t0298100-00 Rice cytosol, extracellular 49.39 45.51
GSMUA_Achr9P04640_001 Banana extracellular 40.24 43.42
Os01t0826800-01 Rice vacuole 44.51 42.69
TraesCS3D01G099200.1 Wheat extracellular 42.68 41.67
TraesCS3B01G115000.1 Wheat extracellular 42.68 41.42
Zm00001d039735_P001 Maize extracellular 45.12 41.34
EES02407 Sorghum extracellular, golgi, plasma membrane 46.34 41.3
TraesCS3A01G098800.1 Wheat extracellular 42.68 41.18
CDX94651 Canola cytosol, extracellular 43.9 40.68
Os05t0474700-01 Rice extracellular 41.46 39.77
CDY15646 Canola cytosol, extracellular 42.07 38.98
EES03819 Sorghum extracellular 42.07 38.98
Zm00001d043024_P001 Maize extracellular 40.24 38.82
EES18380 Sorghum extracellular 43.9 38.71
CDY43324 Canola cytosol, endoplasmic reticulum 40.24 38.15
TraesCS3D01G341300.1 Wheat extracellular 38.41 37.95
TraesCS1D01G292900.1 Wheat extracellular 40.24 37.71
CDX90174 Canola cytosol, endoplasmic reticulum 39.02 37.43
Zm00001d012480_P001 Maize extracellular 39.63 37.36
TraesCS1B01G307800.1 Wheat extracellular, vacuole 39.63 36.72
Zm00001d038450_P001 Maize vacuole 39.02 36.36
TraesCS3A01G347700.1 Wheat extracellular 37.2 36.31
TraesCS3B01G379600.1 Wheat extracellular 35.98 36.2
TraesCS1A01G298300.1 Wheat extracellular, vacuole 39.02 36.16
Os04t0630700-01 Rice cytosol 19.51 29.63
Protein Annotations
EnsemblPlants:CDY15595EnsemblPlantsGene:GSBRNA2T00089779001InterPro:DUF4228_plantPANTHER:PTHR33052PANTHER:PTHR33052:SF26PFAM:PF14009
ProteinID:CDY15595ProteinID:CDY15595.1SEG:segSignalP:SignalP-noTMUniParc:UPI0004EE6CF6UniProt:A0A078FME4
MapMan:35.2:::::
Description
BnaA08g28790DBnaA08g28790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FME4]
Coordinates
chrLK032055:-:662685..663179
Molecular Weight (calculated)
18266.9 Da
IEP (calculated)
9.404
GRAVY (calculated)
-0.588
Length
164 amino acids
Sequence
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHI DEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKEGHSPN
101: KTPNNNPKAD LGEVKDVKQC EKYLEGVVSS TSNGKEQRHR RRHSRSVSVS SWQPHLDSIS EDLN
Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN
Arabidopsis Description
6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.