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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015540.1-P Field mustard extracellular, golgi 82.84 82.84
AT1G06980.1 Thale cress extracellular, golgi 82.84 82.84
CDY10237 Canola extracellular, golgi 82.84 82.84
CDY09944 Canola extracellular, golgi 78.7 79.64
CDX86506 Canola extracellular, golgi 73.37 73.81
CDX97836 Canola extracellular 68.64 72.05
CDY15595 Canola extracellular, golgi 68.64 70.73
CDY02050 Canola extracellular 66.86 70.62
VIT_06s0004g07460.t01 Wine grape extracellular, golgi 60.35 68.92
CDX84851 Canola extracellular 63.31 67.72
CDX84850 Canola extracellular 63.31 67.72
CDY24020 Canola extracellular 61.54 65.82
CDY29687 Canola extracellular 68.64 64.8
GSMUA_Achr6P32750_001 Banana extracellular, vacuole 51.48 61.7
KRG98199 Soybean extracellular 58.58 60.0
KRH30160 Soybean extracellular 59.17 59.88
KRH17122 Soybean extracellular, golgi 58.58 59.28
GSMUA_Achr5P29500_001 Banana extracellular, vacuole 50.89 58.9
GSMUA_Achr5P28030_001 Banana cytosol, extracellular 46.15 56.12
Solyc06g007370.1.1 Tomato extracellular 52.66 55.97
GSMUA_Achr11P... Banana cytosol, extracellular 46.75 55.24
PGSC0003DMT400052957 Potato extracellular 53.85 55.15
Zm00001d009826_P001 Maize extracellular 47.34 54.42
KRH72764 Soybean extracellular 55.03 54.39
TraesCS1D01G112900.1 Wheat extracellular 53.85 53.53
TraesCS1B01G131700.1 Wheat extracellular 53.25 52.94
TraesCS1A01G111500.1 Wheat extracellular 53.25 52.94
GSMUA_Achr11P... Banana cytosol 51.48 52.41
EES17778 Sorghum extracellular, golgi 52.66 51.74
Zm00001d028798_P001 Maize extracellular, vacuole 49.11 51.55
Os05t0165200-00 Rice extracellular 50.3 50.0
EER95013 Sorghum extracellular, vacuole 48.52 49.1
HORVU4Hr1G055090.1 Barley extracellular 49.11 48.82
TraesCS4A01G114800.1 Wheat extracellular 47.93 47.09
TraesCS4D01G190800.1 Wheat extracellular 47.34 47.06
Os03t0298100-00 Rice cytosol, extracellular 49.11 46.63
TraesCS4B01G189400.1 Wheat extracellular, vacuole 46.75 46.47
GSMUA_Achr9P04640_001 Banana extracellular 41.42 46.05
Os01t0165600-00 Rice extracellular, golgi, mitochondrion, nucleus 45.56 45.29
Zm00001d039735_P001 Maize extracellular 47.34 44.69
CDX94651 Canola cytosol, extracellular 45.56 43.5
EES02407 Sorghum extracellular, golgi, plasma membrane 47.34 43.48
Os01t0826800-01 Rice vacuole 43.79 43.27
TraesCS3B01G115000.1 Wheat extracellular 43.2 43.2
TraesCS3D01G099200.1 Wheat extracellular 42.6 42.86
Os05t0474700-01 Rice extracellular 43.2 42.69
CDY15646 Canola cytosol, extracellular 44.38 42.37
TraesCS3A01G098800.1 Wheat extracellular 42.6 42.35
CDX90174 Canola cytosol, endoplasmic reticulum 42.01 41.52
Zm00001d043024_P001 Maize extracellular 41.42 41.18
TraesCS3B01G379600.1 Wheat extracellular 39.65 41.1
EES03819 Sorghum extracellular 42.01 40.11
CDY43324 Canola cytosol, endoplasmic reticulum 40.83 39.88
TraesCS3A01G347700.1 Wheat extracellular 39.65 39.88
EES18380 Sorghum extracellular 43.79 39.78
Zm00001d038450_P001 Maize vacuole 41.42 39.77
TraesCS1D01G292900.1 Wheat extracellular 40.83 39.43
Zm00001d012480_P001 Maize extracellular 40.24 39.08
TraesCS1B01G307800.1 Wheat extracellular, vacuole 40.83 38.98
TraesCS3D01G341300.1 Wheat extracellular 37.87 38.55
TraesCS1A01G298300.1 Wheat extracellular, vacuole 40.24 38.42
Os04t0630700-01 Rice cytosol 17.75 27.78
Protein Annotations
EnsemblPlants:CDY54890EnsemblPlantsGene:GSBRNA2T00014795001InterPro:DUF4228_plantPANTHER:PTHR33052PANTHER:PTHR33052:SF26PFAM:PF14009
ProteinID:CDY54890ProteinID:CDY54890.1SEG:segSignalP:SignalP-noTMUniParc:UPI0004EDBD0EUniProt:A0A078IZJ0
MapMan:35.2:::::
Description
BnaA10g28010DBnaA10g28010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZJ0]
Coordinates
chrLK033358:-:57300..57809
Molecular Weight (calculated)
18976.8 Da
IEP (calculated)
9.131
GRAVY (calculated)
-0.551
Length
169 amino acids
Sequence
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDGHNRP
101: KKILINKPSA DAGEVKEDDE CAKLCEKYLE EVVSSRSSGK EHRHRRRHSR SASVSTWRPH LDSISEDVN
Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN
Arabidopsis Description
6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.