Factsheet for GSMUA_Achr11P23710_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P29500_001	Banana	extracellular, vacuole	66.87	76.03
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	54.22	63.83
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	53.01	63.31
GSMUA_Achr11P...	Banana	cytosol, extracellular	54.22	62.94
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	54.22	60.81
GSMUA_Achr9P04640_001	Banana	extracellular	48.8	53.29
KRG98199	Soybean	extracellular	51.81	52.12
KRH30160	Soybean	extracellular	52.41	52.1
Solyc06g007370.1.1	Tomato	extracellular	49.4	51.57
KRH17122	Soybean	extracellular, golgi	51.81	51.5
CDY54890	Canola	extracellular, golgi	52.41	51.48
CDY15595	Canola	extracellular, golgi	50.6	51.22
CDY10237	Canola	extracellular, golgi	51.81	50.89
Bra015540.1-P	Field mustard	extracellular, golgi	51.81	50.89
AT1G06980.1	Thale cress	extracellular, golgi	51.81	50.89
CDY02050	Canola	extracellular	48.8	50.62
Bra030668.1-P	Field mustard	extracellular, golgi	50.0	50.61
CDX97836	Canola	extracellular	48.8	50.31
CDY24020	Canola	extracellular	47.59	50.0
CDX86506	Canola	extracellular, golgi	50.6	50.0
CDX84851	Canola	extracellular	47.59	50.0
CDX84850	Canola	extracellular	47.59	50.0
Bra018326.1-P	Field mustard	extracellular	53.61	50.0
Bra031549.1-P	Field mustard	extracellular, golgi	50.0	49.7
PGSC0003DMT400052957	Potato	extracellular	49.4	49.7
KRH72764	Soybean	extracellular	50.6	49.12
CDY09944	Canola	extracellular, golgi	49.4	49.1
AT2G30230.1	Thale cress	extracellular	51.81	48.59
CDY29687	Canola	extracellular	51.2	47.49
Bra022784.1-P	Field mustard	extracellular	50.0	47.16
Bra021621.1-P	Field mustard	extracellular	50.0	46.37
GSMUA_Achr6P26830_001	Banana	cytosol, endoplasmic reticulum, plastid	45.18	45.45
GSMUA_Achr4P08040_001	Banana	extracellular	45.18	44.38
GSMUA_Achr6P22730_001	Banana	cytosol	42.77	43.03
GSMUA_Achr7P25280_001	Banana	extracellular	39.76	37.93

Protein Annotations

EnsemblPlants:GSMUA_Achr11P23710_001	EnsemblPlants:GSMUA_Achr11T23710_001	EnsemblPlantsGene:GSMUA_Achr11G23710_001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26
PFAM:PF14009	SEG:seg	UniParc:UPI000295CC02	UniProt:M0RUV1	MapMan:35.2	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G23710_001]

Coordinates

chr11:-:23522716..23523438

Molecular Weight (calculated)

18420.3 Da

IEP (calculated)

10.252

GRAVY (calculated)

-0.493

Length

166 amino acids

Sequence
(BLAST)

001: MIQLQDHQSD VQLSKNMGNS LRCCLACVLP CGALDVIRIV HLNGRVEEYS RQVSAGEILA ANPNHIISKP CSQGVTRKIL IVSPDSDLKR GHIYFLIPES
101: AFPGPAGKKR KKKRHQKTGG DVAAKESDHD NDRLSAIVSE KKACHRRRRS GRVGVWRPHL ESISEV

Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.