Factsheet for GSMUA_Achr5P29500_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	76.03	66.87
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	60.96	63.12
GSMUA_Achr11P...	Banana	cytosol, extracellular	61.64	62.94
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	58.22	61.15
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	61.64	60.81
GSMUA_Achr9P04640_001	Banana	extracellular	58.22	55.92
Bra015540.1-P	Field mustard	extracellular, golgi	59.59	51.48
KRH17122	Soybean	extracellular, golgi	58.22	50.9
CDY54890	Canola	extracellular, golgi	58.9	50.89
CDY10237	Canola	extracellular, golgi	58.9	50.89
CDY15595	Canola	extracellular, golgi	56.85	50.61
KRG98199	Soybean	extracellular	56.85	50.3
Bra031549.1-P	Field mustard	extracellular, golgi	57.53	50.3
AT1G06980.1	Thale cress	extracellular, golgi	58.22	50.3
CDY09944	Canola	extracellular, golgi	56.85	49.7
KRH30160	Soybean	extracellular	56.85	49.7
CDX97836	Canola	extracellular	54.79	49.69
Bra030668.1-P	Field mustard	extracellular, golgi	55.48	49.39
CDY24020	Canola	extracellular	53.42	49.37
CDX86506	Canola	extracellular, golgi	56.16	48.81
CDY02050	Canola	extracellular	53.42	48.75
CDX84851	Canola	extracellular	52.74	48.73
CDX84850	Canola	extracellular	52.74	48.73
KRH72764	Soybean	extracellular	56.16	47.95
Solyc06g007370.1.1	Tomato	extracellular	52.05	47.8
Bra018326.1-P	Field mustard	extracellular	58.22	47.75
PGSC0003DMT400052957	Potato	extracellular	53.42	47.27
Bra022784.1-P	Field mustard	extracellular	56.85	47.16
AT2G30230.1	Thale cress	extracellular	56.85	46.89
CDY29687	Canola	extracellular	56.85	46.37
Bra021621.1-P	Field mustard	extracellular	56.85	46.37
GSMUA_Achr4P08040_001	Banana	extracellular	50.0	43.2
GSMUA_Achr6P26830_001	Banana	cytosol, endoplasmic reticulum, plastid	48.63	43.03
GSMUA_Achr6P22730_001	Banana	cytosol	47.26	41.82
GSMUA_Achr7P25280_001	Banana	extracellular	47.26	39.66

Protein Annotations

EnsemblPlants:GSMUA_Achr5P29500_001	EnsemblPlants:GSMUA_Achr5T29500_001	EnsemblPlantsGene:GSMUA_Achr5G29500_001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26
PFAM:PF14009	SignalP:SignalP-noTM	UniParc:UPI0002958790	UniProt:M0T2S4	MapMan:35.2	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G29500_001]

Coordinates

chr5:+:29191482..29191922

Molecular Weight (calculated)

16204.6 Da

IEP (calculated)

9.441

GRAVY (calculated)

-0.371

Length

146 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CILPCGALDV IRIVHLDGQV EEYSSRQVSA GEILAANPDH ILSKPCSQGV TTKILIVSPD SDLKRGHIYF LIPESALPGK ERKKRHQKSG
101: STAVVQELGH DSCLRQVLSE KKVRHRRRRS GQVGVWRPRL ESISED

Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.