Factsheet for Solyc06g007370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052957	Potato	extracellular	79.87	76.97
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	56.6	60.81
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	51.57	58.16
Zm00001d009826_P001	Maize	extracellular	53.46	57.82
KRG98199	Soybean	extracellular	59.12	56.97
CDX84850	Canola	extracellular	55.35	55.7
CDX84851	Canola	extracellular	55.35	55.7
KRH30160	Soybean	extracellular	58.49	55.69
CDY02050	Canola	extracellular	55.97	55.62
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	47.8	54.68
CDY09944	Canola	extracellular, golgi	57.23	54.49
Bra031549.1-P	Field mustard	extracellular, golgi	57.23	54.49
CDX97836	Canola	extracellular	54.72	54.04
Bra015540.1-P	Field mustard	extracellular, golgi	57.23	53.85
KRH72764	Soybean	extracellular	57.86	53.8
Bra030668.1-P	Field mustard	extracellular, golgi	55.35	53.66
KRH17122	Soybean	extracellular, golgi	55.97	53.29
CDY24020	Canola	extracellular	52.83	53.16
GSMUA_Achr11P...	Banana	cytosol, extracellular	47.8	53.15
CDY15595	Canola	extracellular, golgi	54.72	53.05
CDY54890	Canola	extracellular, golgi	55.97	52.66
AT1G06980.1	Thale cress	extracellular, golgi	55.97	52.66
Bra018326.1-P	Field mustard	extracellular	58.49	52.25
CDY10237	Canola	extracellular, golgi	55.35	52.07
GSMUA_Achr5P29500_001	Banana	extracellular, vacuole	47.8	52.05
TraesCS1D01G112900.1	Wheat	extracellular	55.35	51.76
AT2G30230.1	Thale cress	extracellular	57.23	51.41
CDX86506	Canola	extracellular, golgi	54.09	51.19
EES17778	Sorghum	extracellular, golgi	55.35	51.16
Zm00001d028798_P001	Maize	extracellular, vacuole	50.94	50.31
TraesCS1B01G131700.1	Wheat	extracellular	53.46	50.0
TraesCS1A01G111500.1	Wheat	extracellular	53.46	50.0
Bra022784.1-P	Field mustard	extracellular	55.35	50.0
Os05t0165200-00	Rice	extracellular	53.46	50.0
CDY29687	Canola	extracellular	55.97	49.72
GSMUA_Achr11P...	Banana	cytosol	51.57	49.4
EER95013	Sorghum	extracellular, vacuole	51.57	49.1
HORVU4Hr1G055090.1	Barley	extracellular	52.2	48.82
Bra021621.1-P	Field mustard	extracellular	54.72	48.6
TraesCS4D01G190800.1	Wheat	extracellular	51.57	48.24
Os03t0298100-00	Rice	cytosol, extracellular	53.46	47.75
TraesCS4B01G189400.1	Wheat	extracellular, vacuole	50.94	47.65
TraesCS4A01G114800.1	Wheat	extracellular	50.94	47.09
GSMUA_Achr9P04640_001	Banana	extracellular	41.51	43.42
EES02407	Sorghum	extracellular, golgi, plasma membrane	49.69	42.93
Os01t0165600-00	Rice	extracellular, golgi, mitochondrion, nucleus	45.28	42.35
TraesCS3B01G115000.1	Wheat	extracellular	44.65	42.01
TraesCS3D01G099200.1	Wheat	extracellular	44.03	41.67
TraesCS3A01G098800.1	Wheat	extracellular	44.03	41.18
Os05t0474700-01	Rice	extracellular	44.03	40.94
Os01t0826800-01	Rice	vacuole	44.03	40.94
TraesCS1B01G307800.1	Wheat	extracellular, vacuole	45.28	40.68
Zm00001d039735_P001	Maize	extracellular	45.28	40.22
TraesCS1A01G298300.1	Wheat	extracellular, vacuole	44.65	40.11
Zm00001d043024_P001	Maize	extracellular	42.77	40.0
TraesCS1D01G292900.1	Wheat	extracellular	43.4	39.43
TraesCS3A01G347700.1	Wheat	extracellular	41.51	39.29
EES03819	Sorghum	extracellular	43.4	38.98
TraesCS3B01G379600.1	Wheat	extracellular	38.99	38.04
EES18380	Sorghum	extracellular	44.03	37.63
TraesCS3D01G341300.1	Wheat	extracellular	38.36	36.75
Zm00001d038450_P001	Maize	vacuole	40.25	36.36
Solyc02g076800.1.1	Tomato	extracellular	42.77	35.6
Zm00001d012480_P001	Maize	extracellular	37.74	34.48
Solyc03g006160.1.1	Tomato	cytosol, extracellular, nucleus	38.99	34.25
Os04t0630700-01	Rice	cytosol	18.87	27.78

Protein Annotations

EnsemblPlants:Solyc06g007370.1.1	EnsemblPlantsGene:Solyc06g007370.1	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26	PFAM:PF14009
SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0002766111	UniProt:K4C3C0	MapMan:35.2	:

Description

No Description!

Coordinates

chr6:+:1406687..1407166

Molecular Weight (calculated)

17612.4 Da

IEP (calculated)

10.252

GRAVY (calculated)

-0.391

Length

159 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV EEITSPITAY EVLKNYPNHV LSKPCSQGTM ARRILILSPE SELKRGSIYF LIPASSVPEK KKKSGITSSS
101: INRLPKNNNK KCHVTINDGD RDFSSDSTMP KLKKSSSHRR SKSGKVVVWR PHLTTISED

Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.