Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84850 Canola extracellular 86.93 96.84
CDX84851 Canola extracellular 86.93 96.84
CDY24020 Canola extracellular 84.66 94.3
Bra021621.1-P Field mustard extracellular 82.39 81.01
Bra018326.1-P Field mustard extracellular 73.3 72.47
AT2G30230.1 Thale cress extracellular 71.02 70.62
Bra030668.1-P Field mustard extracellular, golgi 63.64 68.29
VIT_06s0004g07460.t01 Wine grape extracellular, golgi 56.82 67.57
Bra031549.1-P Field mustard extracellular, golgi 61.93 65.27
Bra015540.1-P Field mustard extracellular, golgi 61.36 63.91
KRH17122 Soybean extracellular, golgi 56.82 59.88
KRH30160 Soybean extracellular 55.11 58.08
KRG98199 Soybean extracellular 53.98 57.58
GSMUA_Achr6P32750_001 Banana extracellular, vacuole 46.02 57.45
GSMUA_Achr5P29500_001 Banana extracellular, vacuole 47.16 56.85
Solyc06g007370.1.1 Tomato extracellular 50.0 55.35
GSMUA_Achr11P... Banana cytosol, extracellular 44.89 55.24
GSMUA_Achr5P28030_001 Banana cytosol, extracellular 43.18 54.68
PGSC0003DMT400052957 Potato extracellular 51.14 54.55
TraesCS1B01G131700.1 Wheat extracellular 50.0 51.76
TraesCS1A01G111500.1 Wheat extracellular 50.0 51.76
Zm00001d009826_P001 Maize extracellular 43.18 51.7
KRH72764 Soybean extracellular 50.0 51.46
TraesCS1D01G112900.1 Wheat extracellular 48.86 50.59
EES17778 Sorghum extracellular, golgi 48.86 50.0
GSMUA_Achr11P... Banana cytosol 47.16 50.0
TraesCS4D01G190800.1 Wheat extracellular 46.59 48.24
Os05t0165200-00 Rice extracellular 46.59 48.24
HORVU4Hr1G055090.1 Barley extracellular 46.59 48.24
TraesCS4B01G189400.1 Wheat extracellular, vacuole 46.02 47.65
EER95013 Sorghum extracellular, vacuole 44.89 47.31
Zm00001d028798_P001 Maize extracellular, vacuole 43.18 47.2
TraesCS4A01G114800.1 Wheat extracellular 44.89 45.93
Os03t0298100-00 Rice cytosol, extracellular 46.02 45.51
Os01t0826800-01 Rice vacuole 43.18 44.44
TraesCS3A01G098800.1 Wheat extracellular 42.05 43.53
TraesCS3D01G099200.1 Wheat extracellular 41.48 43.45
Os05t0474700-01 Rice extracellular 42.05 43.27
GSMUA_Achr9P04640_001 Banana extracellular 36.93 42.76
Zm00001d043024_P001 Maize extracellular 40.91 42.35
TraesCS3B01G115000.1 Wheat extracellular 40.34 42.01
EES18380 Sorghum extracellular 44.32 41.94
Zm00001d039735_P001 Maize extracellular 42.61 41.9
EES03819 Sorghum extracellular 42.05 41.81
Os01t0165600-00 Rice extracellular, golgi, mitochondrion, nucleus 40.34 41.76
TraesCS1D01G292900.1 Wheat extracellular 40.91 41.14
Zm00001d038450_P001 Maize vacuole 40.91 40.91
EES02407 Sorghum extracellular, golgi, plasma membrane 42.61 40.76
TraesCS1B01G307800.1 Wheat extracellular, vacuole 40.91 40.68
Zm00001d012480_P001 Maize extracellular 39.77 40.23
TraesCS1A01G298300.1 Wheat extracellular, vacuole 40.34 40.11
TraesCS3B01G379600.1 Wheat extracellular 36.93 39.88
Bra010845.1-P Field mustard cytosol, endoplasmic reticulum 38.64 38.64
Bra030125.1-P Field mustard cytosol, extracellular 38.64 38.42
TraesCS3A01G347700.1 Wheat extracellular 36.36 38.1
TraesCS3D01G341300.1 Wheat extracellular 35.8 37.95
Os04t0630700-01 Rice cytosol 15.34 25.0
Protein Annotations
EnsemblPlants:Bra022784.1EnsemblPlants:Bra022784.1-PEnsemblPlantsGene:Bra022784InterPro:DUF4228_plantPANTHER:PTHR33052PANTHER:PTHR33052:SF26
PFAM:PF14009SEG:segSignalP:SignalP-noTMUniParc:UPI000254022CUniProt:M4E1Y4MapMan:35.2
Description
AT2G30230 (E=1e-068) | unknown protein
Coordinates
chrA03:+:7041681..7042211
Molecular Weight (calculated)
19879.4 Da
IEP (calculated)
10.121
GRAVY (calculated)
-0.473
Length
176 amino acids
Sequence
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITRPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSLPEKK KTKKKKEVQR
101: RKKSPENAND IKIHHMVSTS KDLDLTLCEK YLEDVMLSSS KKCFPAGKEN RHRRRHSRPA SVSLWRPQLA SISEDF
Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN
Arabidopsis Description
6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.