Factsheet for GSMUA_Achr5P28030_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	70.5	69.5
GSMUA_Achr11P...	Banana	cytosol, extracellular	71.22	69.23
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	62.59	58.78
GSMUA_Achr5P29500_001	Banana	extracellular, vacuole	61.15	58.22
GSMUA_Achr9P04640_001	Banana	extracellular	61.87	56.58
Zm00001d009826_P001	Maize	extracellular	56.83	53.74
GSMUA_Achr11P...	Banana	cytosol	63.31	53.01
Zm00001d028798_P001	Maize	extracellular, vacuole	58.99	50.93
EER95013	Sorghum	extracellular, vacuole	60.43	50.3
TraesCS1D01G112900.1	Wheat	extracellular	59.71	48.82
CDY24020	Canola	extracellular	54.68	48.1
KRH30160	Soybean	extracellular	57.55	47.9
KRG98199	Soybean	extracellular	56.83	47.88
Solyc06g007370.1.1	Tomato	extracellular	54.68	47.8
TraesCS1B01G131700.1	Wheat	extracellular	58.27	47.65
TraesCS1A01G111500.1	Wheat	extracellular	58.27	47.65
Os01t0826800-01	Rice	vacuole	58.27	47.37
CDY10237	Canola	extracellular, golgi	57.55	47.34
CDX97836	Canola	extracellular	54.68	47.2
CDX84851	Canola	extracellular	53.24	46.84
CDX84850	Canola	extracellular	53.24	46.84
Os05t0474700-01	Rice	extracellular	57.55	46.78
AT1G06980.1	Thale cress	extracellular, golgi	56.83	46.75
Bra015540.1-P	Field mustard	extracellular, golgi	56.83	46.75
KRH17122	Soybean	extracellular, golgi	56.12	46.71
PGSC0003DMT400052957	Potato	extracellular	55.4	46.67
Bra030668.1-P	Field mustard	extracellular, golgi	54.68	46.34
CDY02050	Canola	extracellular	53.24	46.25
KRH72764	Soybean	extracellular	56.83	46.2
CDY54890	Canola	extracellular, golgi	56.12	46.15
CDY09944	Canola	extracellular, golgi	55.4	46.11
Bra031549.1-P	Field mustard	extracellular, golgi	55.4	46.11
EES17778	Sorghum	extracellular, golgi	56.83	45.93
CDY15595	Canola	extracellular, golgi	53.96	45.73
Os05t0165200-00	Rice	extracellular	55.4	45.29
TraesCS4D01G190800.1	Wheat	extracellular	55.4	45.29
Zm00001d043024_P001	Maize	extracellular	55.4	45.29
CDX86506	Canola	extracellular, golgi	54.68	45.24
EES03819	Sorghum	extracellular	57.55	45.2
TraesCS1B01G307800.1	Wheat	extracellular, vacuole	57.55	45.2
TraesCS1D01G292900.1	Wheat	extracellular	56.83	45.14
HORVU4Hr1G055090.1	Barley	extracellular	54.68	44.71
TraesCS4B01G189400.1	Wheat	extracellular, vacuole	54.68	44.71
TraesCS1A01G298300.1	Wheat	extracellular, vacuole	56.83	44.63
Os03t0298100-00	Rice	cytosol, extracellular	56.83	44.38
EES18380	Sorghum	extracellular	58.99	44.09
Bra018326.1-P	Field mustard	extracellular	56.12	43.82
TraesCS4A01G114800.1	Wheat	extracellular	53.96	43.6
CDY29687	Canola	extracellular	56.12	43.58
TraesCS3B01G379600.1	Wheat	extracellular	51.08	43.56
Os01t0165600-00	Rice	extracellular, golgi, mitochondrion, nucleus	53.24	43.53
AT2G30230.1	Thale cress	extracellular	55.4	43.5
Bra022784.1-P	Field mustard	extracellular	54.68	43.18
Zm00001d012480_P001	Maize	extracellular	53.96	43.1
Bra021621.1-P	Field mustard	extracellular	55.4	43.02
Zm00001d039735_P001	Maize	extracellular	54.68	42.46
TraesCS3A01G347700.1	Wheat	extracellular	51.08	42.26
TraesCS3D01G099200.1	Wheat	extracellular	51.08	42.26
TraesCS3D01G341300.1	Wheat	extracellular	49.64	41.57
TraesCS3B01G115000.1	Wheat	extracellular	50.36	41.42
EES02407	Sorghum	extracellular, golgi, plasma membrane	54.68	41.3
TraesCS3A01G098800.1	Wheat	extracellular	50.36	41.18
Zm00001d038450_P001	Maize	vacuole	51.08	40.34
GSMUA_Achr6P26830_001	Banana	cytosol, endoplasmic reticulum, plastid	47.48	40.0
GSMUA_Achr6P22730_001	Banana	cytosol	46.76	39.39
GSMUA_Achr4P08040_001	Banana	extracellular	46.76	38.46
GSMUA_Achr7P25280_001	Banana	extracellular	46.04	36.78
Os04t0630700-01	Rice	cytosol	20.86	26.85

Protein Annotations

EnsemblPlants:GSMUA_Achr5P28030_001	EnsemblPlants:GSMUA_Achr5T28030_001	EnsemblPlantsGene:GSMUA_Achr5G28030_001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26
PFAM:PF14009	SignalP:SignalP-noTM	UniParc:UPI000295AA01	UniProt:M0T2C7	MapMan:35.2	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G28030_001]

Coordinates

chr5:-:28393678..28394097

Molecular Weight (calculated)

15519.0 Da

IEP (calculated)

10.596

GRAVY (calculated)

-0.415

Length

139 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDV VRVVHLSGHV EEYSRRVSAG EILAANPNHV LTRPCSRGVG RRILIVPPES ELKRGRIYFL MPAPTLPEQK RRRHTMVRTR
101: GGDEYTTEIA SGKKPIHRRR PSGRVGVHRS QLESICEDS

Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.