CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54890	Canola	extracellular, golgi	82.84	82.84
AT1G06980.1	Thale cress	extracellular, golgi	78.7	78.7
Bra015540.1-P	Field mustard	extracellular, golgi	76.33	76.33
CDY09944	Canola	extracellular, golgi	74.56	75.45
CDX86506	Canola	extracellular, golgi	72.78	73.21
CDY15595	Canola	extracellular, golgi	70.41	72.56
CDX97836	Canola	extracellular	67.46	70.81
CDY02050	Canola	extracellular	66.27	70.0
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	60.95	69.59
CDX84851	Canola	extracellular	63.31	67.72
CDX84850	Canola	extracellular	63.31	67.72
CDY24020	Canola	extracellular	62.72	67.09
CDY29687	Canola	extracellular	68.05	64.25
KRH30160	Soybean	extracellular	60.95	61.68
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	50.89	60.99
KRG98199	Soybean	extracellular	58.58	60.0
KRH17122	Soybean	extracellular, golgi	58.58	59.28
GSMUA_Achr5P29500_001	Banana	extracellular, vacuole	50.89	58.9
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	47.34	57.55
GSMUA_Achr11P...	Banana	cytosol, extracellular	47.34	55.94
Zm00001d009826_P001	Maize	extracellular	48.52	55.78
Solyc06g007370.1.1	Tomato	extracellular	52.07	55.35
KRH72764	Soybean	extracellular	54.44	53.8
PGSC0003DMT400052957	Potato	extracellular	52.07	53.33
TraesCS1D01G112900.1	Wheat	extracellular	52.66	52.35
Zm00001d028798_P001	Maize	extracellular, vacuole	49.7	52.17
GSMUA_Achr11P...	Banana	cytosol	50.89	51.81
TraesCS1B01G131700.1	Wheat	extracellular	51.48	51.18
TraesCS1A01G111500.1	Wheat	extracellular	51.48	51.18
EES17778	Sorghum	extracellular, golgi	51.48	50.58
EER95013	Sorghum	extracellular, vacuole	49.7	50.3
Os05t0165200-00	Rice	extracellular	49.7	49.41
TraesCS4D01G190800.1	Wheat	extracellular	48.52	48.24
HORVU4Hr1G055090.1	Barley	extracellular	47.93	47.65
TraesCS4B01G189400.1	Wheat	extracellular, vacuole	47.93	47.65
Os01t0165600-00	Rice	extracellular, golgi, mitochondrion, nucleus	47.34	47.06
Os03t0298100-00	Rice	cytosol, extracellular	48.52	46.07
TraesCS4A01G114800.1	Wheat	extracellular	46.75	45.93
Zm00001d039735_P001	Maize	extracellular	47.93	45.25
GSMUA_Achr9P04640_001	Banana	extracellular	40.24	44.74
EES02407	Sorghum	extracellular, golgi, plasma membrane	47.93	44.02
CDX94651	Canola	cytosol, extracellular	45.56	43.5
Os01t0826800-01	Rice	vacuole	43.79	43.27
TraesCS3B01G115000.1	Wheat	extracellular	43.2	43.2
TraesCS3D01G099200.1	Wheat	extracellular	42.6	42.86
Os05t0474700-01	Rice	extracellular	43.2	42.69
CDY15646	Canola	cytosol, extracellular	44.38	42.37
TraesCS3A01G098800.1	Wheat	extracellular	42.6	42.35
CDX90174	Canola	cytosol, endoplasmic reticulum	42.01	41.52
CDY43324	Canola	cytosol, endoplasmic reticulum	42.01	41.04
Zm00001d043024_P001	Maize	extracellular	40.83	40.59
EES18380	Sorghum	extracellular	44.38	40.32
TraesCS1B01G307800.1	Wheat	extracellular, vacuole	42.01	40.11
TraesCS3B01G379600.1	Wheat	extracellular	38.46	39.88
Zm00001d038450_P001	Maize	vacuole	41.42	39.77
TraesCS1A01G298300.1	Wheat	extracellular, vacuole	41.42	39.55
EES03819	Sorghum	extracellular	41.42	39.55
TraesCS3D01G341300.1	Wheat	extracellular	38.46	39.16
TraesCS1D01G292900.1	Wheat	extracellular	40.24	38.86
Zm00001d012480_P001	Maize	extracellular	39.65	38.51
TraesCS3A01G347700.1	Wheat	extracellular	37.28	37.5
Os04t0630700-01	Rice	cytosol	18.93	29.63

Protein Annotations

EnsemblPlants:CDY10237	EnsemblPlantsGene:GSBRNA2T00032061001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26	PFAM:PF14009
ProteinID:CDY10237	ProteinID:CDY10237.1	SignalP:SignalP-noTM	UniParc:UPI0004EBD20C	UniProt:A0A078FB05	MapMan:35.2

Description

BnaC05g04800DBnaC05g04800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB05]

Coordinates

chrLK032001:-:706390..707230

Molecular Weight (calculated)

18962.8 Da

IEP (calculated)

9.108

GRAVY (calculated)

-0.533

Length

169 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDGHNRP
101: KKTLINKPSA DVGDVKEDDE CAKLCEKYLE EVVSSTSSGK QHRHRRRYSR SATVSTWRPH LDSISEDVN

Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.