Factsheet for Os01t0165600-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, extracellular, nucleus

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039735_P001	Maize	extracellular	65.88	62.57
EES02407	Sorghum	extracellular, golgi, plasma membrane	66.47	61.41
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	47.06	56.74
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	48.24	55.41
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	43.53	53.24
Os04t0630700-01	Rice	cytosol	33.53	52.78
Os05t0165200-00	Rice	extracellular	51.76	51.76
GSMUA_Achr11P...	Banana	cytosol, extracellular	41.76	49.65
Bra030668.1-P	Field mustard	extracellular, golgi	46.47	48.17
CDY15595	Canola	extracellular, golgi	45.88	47.56
CDY10237	Canola	extracellular, golgi	47.06	47.34
CDX86506	Canola	extracellular, golgi	45.88	46.43
CDY02050	Canola	extracellular	43.53	46.25
CDY09944	Canola	extracellular, golgi	45.29	46.11
Os03t0298100-00	Rice	cytosol, extracellular	48.24	46.07
KRG98199	Soybean	extracellular	44.71	46.06
CDX97836	Canola	extracellular	43.53	45.96
CDY24020	Canola	extracellular	42.35	45.57
CDY54890	Canola	extracellular, golgi	45.29	45.56
Bra031549.1-P	Field mustard	extracellular, golgi	44.71	45.51
GSMUA_Achr9P04640_001	Banana	extracellular	40.59	45.39
Solyc06g007370.1.1	Tomato	extracellular	42.35	45.28
AT1G06980.1	Thale cress	extracellular, golgi	44.12	44.38
KRH17122	Soybean	extracellular, golgi	43.53	44.31
KRH30160	Soybean	extracellular	43.53	44.31
CDX84851	Canola	extracellular	41.18	44.3
CDX84850	Canola	extracellular	41.18	44.3
Os01t0826800-01	Rice	vacuole	44.12	43.86
PGSC0003DMT400052957	Potato	extracellular	42.35	43.64
AT2G30230.1	Thale cress	extracellular	45.29	43.5
KRH72764	Soybean	extracellular	42.94	42.69
Bra015540.1-P	Field mustard	extracellular, golgi	42.35	42.6
Bra018326.1-P	Field mustard	extracellular	44.12	42.13
CDY29687	Canola	extracellular	44.12	41.9
Os05t0474700-01	Rice	extracellular	41.76	41.52
Bra021621.1-P	Field mustard	extracellular	43.53	41.34
Bra022784.1-P	Field mustard	extracellular	41.76	40.34
Os01t0758500-01	Rice	cytosol	33.53	29.23

Protein Annotations

EnsemblPlants:Os01t0165600-00	EnsemblPlantsGene:Os01g0165600	EntrezGene:107277399	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF30
PFAM:PF14009	ProteinID:BAB64796.1	ProteinID:BAS70565.1	ProteinID:EAZ10672.1	RefSeq:XP_015644624.1	SEG:seg
SignalP:SignalP-noTM	UniParc:UPI00000A3EF3	UniProt:Q942P3	MapMan:35.2	:	:

Description

Similar to H0323C08.17 protein. (Os01t0165600-00)

Coordinates

chr1:+:3376592..3377212

Molecular Weight (calculated)

18020.4 Da

IEP (calculated)

9.170

GRAVY (calculated)

-0.391

Length

170 amino acids

Sequence
(BLAST)

001: MGNNLRCCLA CVLPCGALDL VRIVHLSGRV DEYGRAVSAG EVLAAHPNHV LSRPCSSQQG AAGRILIVSP ESELERGEIY FLIPAASVPD AKRRTSTGGG
101: GAGRGHHVRS KSEGSAVAAD RLGSPAGSAS PETTRMMRAQ KQQHQHRRRM STGSHASPWQ PHLSCITEDP

Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.