Factsheet for Zm00001d039735_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0165600-00	Rice	extracellular, golgi, mitochondrion, nucleus	62.57	65.88
EES02407	Sorghum	extracellular, golgi, plasma membrane	66.48	64.67
TraesCS3B01G115000.1	Wheat	extracellular	59.22	62.72
TraesCS3D01G099200.1	Wheat	extracellular	57.54	61.31
TraesCS3A01G098800.1	Wheat	extracellular	58.1	61.18
Zm00001d009826_P001	Maize	extracellular	48.04	58.5
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	45.81	58.16
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	45.81	55.41
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	42.46	54.68
GSMUA_Achr11P...	Banana	cytosol, extracellular	43.02	53.85
Zm00001d028798_P001	Maize	extracellular, vacuole	45.25	50.31
CDY24020	Canola	extracellular	43.58	49.37
KRG98199	Soybean	extracellular	45.25	49.09
Bra030668.1-P	Field mustard	extracellular, golgi	44.69	48.78
CDY02050	Canola	extracellular	43.58	48.75
CDY10237	Canola	extracellular, golgi	45.25	47.93
CDY54890	Canola	extracellular, golgi	44.69	47.34
Os04t0630700-01	Rice	cytosol	28.49	47.22
CDX84851	Canola	extracellular	41.34	46.84
CDX84850	Canola	extracellular	41.34	46.84
KRH17122	Soybean	extracellular, golgi	43.58	46.71
CDX97836	Canola	extracellular	41.9	46.58
CDX86506	Canola	extracellular, golgi	43.58	46.43
KRH72764	Soybean	extracellular	44.13	46.2
KRH30160	Soybean	extracellular	43.02	46.11
CDY09944	Canola	extracellular, golgi	43.02	46.11
Bra031549.1-P	Field mustard	extracellular, golgi	43.02	46.11
Bra015540.1-P	Field mustard	extracellular, golgi	43.02	45.56
AT1G06980.1	Thale cress	extracellular, golgi	43.02	45.56
Solyc06g007370.1.1	Tomato	extracellular	40.22	45.28
CDY15595	Canola	extracellular, golgi	41.34	45.12
PGSC0003DMT400052957	Potato	extracellular	41.34	44.85
Bra018326.1-P	Field mustard	extracellular	43.58	43.82
Zm00001d043024_P001	Maize	extracellular	41.34	43.53
GSMUA_Achr9P04640_001	Banana	extracellular	36.87	43.42
Bra022784.1-P	Field mustard	extracellular	41.9	42.61
CDY29687	Canola	extracellular	42.46	42.46
AT2G30230.1	Thale cress	extracellular	41.9	42.37
Zm00001d012480_P001	Maize	extracellular	40.78	41.95
Bra021621.1-P	Field mustard	extracellular	41.9	41.9
Zm00001d038450_P001	Maize	vacuole	38.55	39.2
Zm00001d043399_P001	Maize	extracellular	34.64	31.31
Zm00001d012700_P001	Maize	extracellular	34.08	28.37

Protein Annotations

EnsemblPlants:Zm00001d039735_P001	EnsemblPlants:Zm00001d039735_T001	EnsemblPlantsGene:Zm00001d039735	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF30
PFAM:PF14009	ProteinID:ONM29855.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI000221AA4F	UniProt:A0A1D6MKW7
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3:-:13253265..13253804

Molecular Weight (calculated)

18803.5 Da

IEP (calculated)

9.142

GRAVY (calculated)

-0.233

Length

179 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDL VRIVHLSGRV DEYGRAVSAG EVLAAHPNHV LSRPCSSPQG VVRRILIVSP DSELERGEIY FLIPAASVPD AKKGGGGAST
101: PGRHVRSKSE GSVVAAAVTD RQLGLGAESP EEAAAAPAAK KKNQQQHKRA AAQQHRRRMS TGSHAAPWQP HLACIAEDL

Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.