Factsheet for TraesCS3A01G098800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G099200.1	Wheat	extracellular	90.59	91.67
TraesCS3B01G115000.1	Wheat	extracellular	72.35	72.78
Zm00001d039735_P001	Maize	extracellular	61.18	58.1
EES02407	Sorghum	extracellular, golgi, plasma membrane	61.76	57.07
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	44.71	53.9
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	41.18	50.36
TraesCS1A01G111500.1	Wheat	extracellular	50.0	50.0
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	42.35	48.65
GSMUA_Achr11P...	Banana	cytosol, extracellular	39.41	46.85
CDY24020	Canola	extracellular	43.53	46.84
CDX84851	Canola	extracellular	42.94	46.2
CDX84850	Canola	extracellular	42.94	46.2
Os04t0630700-01	Rice	cytosol	28.82	45.37
Bra030668.1-P	Field mustard	extracellular, golgi	43.53	45.12
CDX97836	Canola	extracellular	42.35	44.72
CDX86506	Canola	extracellular, golgi	44.12	44.64
CDY02050	Canola	extracellular	41.76	44.38
Solyc06g007370.1.1	Tomato	extracellular	41.18	44.03
KRG98199	Soybean	extracellular	42.35	43.64
GSMUA_Achr9P04640_001	Banana	extracellular	38.82	43.42
TraesCS4A01G114800.1	Wheat	extracellular	43.53	43.02
CDY15595	Canola	extracellular, golgi	41.18	42.68
CDY10237	Canola	extracellular, golgi	42.35	42.6
CDY54890	Canola	extracellular, golgi	42.35	42.6
Bra031549.1-P	Field mustard	extracellular, golgi	41.76	42.52
CDY09944	Canola	extracellular, golgi	41.76	42.52
Bra022784.1-P	Field mustard	extracellular	43.53	42.05
AT1G06980.1	Thale cress	extracellular, golgi	41.76	42.01
KRH17122	Soybean	extracellular, golgi	41.18	41.92
KRH30160	Soybean	extracellular	41.18	41.92
PGSC0003DMT400052957	Potato	extracellular	40.59	41.82
KRH72764	Soybean	extracellular	41.76	41.52
Bra015540.1-P	Field mustard	extracellular, golgi	41.18	41.42
TraesCS1A01G298300.1	Wheat	extracellular, vacuole	42.94	41.24
Bra018326.1-P	Field mustard	extracellular	42.94	41.01
AT2G30230.1	Thale cress	extracellular	42.35	40.68
Bra021621.1-P	Field mustard	extracellular	42.35	40.22
CDY29687	Canola	extracellular	42.35	40.22
TraesCS3A01G347700.1	Wheat	extracellular	38.82	39.29
TraesCS3A01G306500.1	Wheat	cytosol, extracellular	35.88	31.44

Protein Annotations

EnsemblPlants:TraesCS3A01G098800.1	EnsemblPlantsGene:TraesCS3A01G098800	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF30	PFAM:PF14009
SEG:seg	SignalP:SignalP-noTM	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3A:-:63837525..63838037

Molecular Weight (calculated)

18493.1 Da

IEP (calculated)

10.124

GRAVY (calculated)

-0.521

Length

170 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDL VRIVHLSGRV DEYGRAVLAG EVLAAHPNHV LSRPCGSRQQ GGPRIVIIVS PEAELERGEI YFLLPAASVP ADAKKKTKTK
101: REPSPGAAAE EGPRHHRHHR LHVRSKSEGS AATAAVEGRQ QQQQQHRRRM STGSHATSWH PHLARIAEDP

Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.