Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09944 | Canola | extracellular, golgi | 98.2 | 98.2 |
| AT1G06980.1 | Thale cress | extracellular, golgi | 81.44 | 80.47 |
| Bra030668.1-P | Field mustard | extracellular, golgi | 77.84 | 79.27 |
| Bra015540.1-P | Field mustard | extracellular, golgi | 67.66 | 66.86 |
| VIT_06s0004g07460.t01 | Wine grape | extracellular, golgi | 56.29 | 63.51 |
| Bra018326.1-P | Field mustard | extracellular | 67.66 | 63.48 |
| Bra021621.1-P | Field mustard | extracellular | 67.66 | 63.13 |
| Bra022784.1-P | Field mustard | extracellular | 65.27 | 61.93 |
| GSMUA_Achr6P32750_001 | Banana | extracellular, vacuole | 50.9 | 60.28 |
| KRH30160 | Soybean | extracellular | 58.68 | 58.68 |
| GSMUA_Achr5P29500_001 | Banana | extracellular, vacuole | 50.3 | 57.53 |
| KRH17122 | Soybean | extracellular, golgi | 57.48 | 57.48 |
| Solyc06g007370.1.1 | Tomato | extracellular | 54.49 | 57.23 |
| KRG98199 | Soybean | extracellular | 55.69 | 56.36 |
| GSMUA_Achr5P28030_001 | Banana | cytosol, extracellular | 46.11 | 55.4 |
| PGSC0003DMT400052957 | Potato | extracellular | 53.89 | 54.55 |
| KRH72764 | Soybean | extracellular | 55.69 | 54.39 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 46.11 | 53.85 |
| Zm00001d009826_P001 | Maize | extracellular | 47.31 | 53.74 |
| TraesCS1D01G112900.1 | Wheat | extracellular | 53.29 | 52.35 |
| TraesCS1B01G131700.1 | Wheat | extracellular | 52.1 | 51.18 |
| TraesCS1A01G111500.1 | Wheat | extracellular | 52.1 | 51.18 |
| EES17778 | Sorghum | extracellular, golgi | 52.1 | 50.58 |
| GSMUA_Achr11P... | Banana | cytosol | 49.7 | 50.0 |
| Zm00001d028798_P001 | Maize | extracellular, vacuole | 46.71 | 48.45 |
| Os03t0298100-00 | Rice | cytosol, extracellular | 50.9 | 47.75 |
| Os05t0165200-00 | Rice | extracellular | 48.5 | 47.65 |
| EER95013 | Sorghum | extracellular, vacuole | 47.31 | 47.31 |
| HORVU4Hr1G055090.1 | Barley | extracellular | 47.9 | 47.06 |
| TraesCS4D01G190800.1 | Wheat | extracellular | 47.31 | 46.47 |
| GSMUA_Achr9P04640_001 | Banana | extracellular | 41.92 | 46.05 |
| TraesCS4A01G114800.1 | Wheat | extracellular | 47.31 | 45.93 |
| TraesCS4B01G189400.1 | Wheat | extracellular, vacuole | 46.71 | 45.88 |
| EES02407 | Sorghum | extracellular, golgi, plasma membrane | 49.7 | 45.11 |
| Os01t0165600-00 | Rice | extracellular, golgi, mitochondrion, nucleus | 45.51 | 44.71 |
| Os01t0826800-01 | Rice | vacuole | 44.31 | 43.27 |
| Zm00001d039735_P001 | Maize | extracellular | 46.11 | 43.02 |
| TraesCS3B01G115000.1 | Wheat | extracellular | 42.52 | 42.01 |
| TraesCS3A01G098800.1 | Wheat | extracellular | 42.52 | 41.76 |
| TraesCS3D01G099200.1 | Wheat | extracellular | 41.92 | 41.67 |
| Bra030125.1-P | Field mustard | cytosol, extracellular | 43.71 | 41.24 |
| EES03819 | Sorghum | extracellular | 43.11 | 40.68 |
| TraesCS1B01G307800.1 | Wheat | extracellular, vacuole | 41.92 | 39.55 |
| Zm00001d043024_P001 | Maize | extracellular | 40.12 | 39.41 |
| Bra010845.1-P | Field mustard | cytosol, endoplasmic reticulum | 41.32 | 39.2 |
| Os05t0474700-01 | Rice | extracellular | 40.12 | 39.18 |
| TraesCS1A01G298300.1 | Wheat | extracellular, vacuole | 41.32 | 38.98 |
| TraesCS1D01G292900.1 | Wheat | extracellular | 40.72 | 38.86 |
| TraesCS3B01G379600.1 | Wheat | extracellular | 37.72 | 38.65 |
| EES18380 | Sorghum | extracellular | 42.52 | 38.17 |
| Zm00001d038450_P001 | Maize | vacuole | 40.12 | 38.07 |
| TraesCS3D01G341300.1 | Wheat | extracellular | 37.72 | 37.95 |
| TraesCS3A01G347700.1 | Wheat | extracellular | 37.72 | 37.5 |
| Zm00001d012480_P001 | Maize | extracellular | 38.92 | 37.36 |
| Os04t0630700-01 | Rice | cytosol | 19.16 | 29.63 |
Protein Annotations
| EnsemblPlants:Bra031549.1 | EnsemblPlants:Bra031549.1-P | EnsemblPlantsGene:Bra031549 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF26 |
| PFAM:PF14009 | SEG:seg | UniParc:UPI0002543448 | UniProt:M4ERX2 | MapMan:35.2 | : |
Description
AT1G06980 (E=2e-059) | unknown protein
Coordinates
chrA09:+:35883202..35883705
Molecular Weight (calculated)
18757.4 Da
IEP (calculated)
9.118
GRAVY (calculated)
-0.597
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNSLRCCIA CVLPCGALDL IRIVHLNGHV QEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDSHRQS
101: KTLNNNPTVD APKDDDQSVK LCTEKYLEEV VSSTSTSKEH RHRRRHSRSA SVSTWQPHLD SISEDLN
101: KTLNNNPTVD APKDDDQSVK LCTEKYLEEV VSSTSTSKEH RHRRRHSRSA SVSTWQPHLD SISEDLN
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN
Arabidopsis Description
6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.