Factsheet for Zm00001d012480_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03819	Sorghum	extracellular	80.46	79.1
Zm00001d043024_P001	Maize	extracellular	74.71	76.47
Os01t0826800-01	Rice	vacuole	67.24	68.42
TraesCS3D01G341300.1	Wheat	extracellular	63.22	66.27
TraesCS3B01G379600.1	Wheat	extracellular	61.49	65.64
TraesCS3A01G347700.1	Wheat	extracellular	61.49	63.69
GSMUA_Achr11P...	Banana	cytosol, extracellular	46.55	56.64
Zm00001d038450_P001	Maize	vacuole	56.9	56.25
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	43.1	53.96
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	43.1	53.19
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	43.1	50.68
Zm00001d009826_P001	Maize	extracellular	40.8	48.3
GSMUA_Achr9P04640_001	Banana	extracellular	39.66	45.39
Zm00001d028798_P001	Maize	extracellular, vacuole	40.8	44.1
KRH17122	Soybean	extracellular, golgi	41.38	43.11
CDX84851	Canola	extracellular	37.93	41.77
CDX84850	Canola	extracellular	37.93	41.77
CDX97836	Canola	extracellular	38.51	41.61
CDY02050	Canola	extracellular	37.93	41.25
CDX86506	Canola	extracellular, golgi	39.66	41.07
Zm00001d039735_P001	Maize	extracellular	41.95	40.78
KRG98199	Soybean	extracellular	38.51	40.61
CDY24020	Canola	extracellular	36.78	40.51
AT1G06980.1	Thale cress	extracellular, golgi	39.08	40.24
CDY54890	Canola	extracellular, golgi	39.08	40.24
KRH30160	Soybean	extracellular	38.51	40.12
CDY09944	Canola	extracellular, golgi	38.51	40.12
Bra018326.1-P	Field mustard	extracellular	40.8	39.89
Bra022784.1-P	Field mustard	extracellular	40.23	39.77
CDY29687	Canola	extracellular	40.8	39.66
CDY10237	Canola	extracellular, golgi	38.51	39.65
Bra015540.1-P	Field mustard	extracellular, golgi	38.51	39.65
CDY15595	Canola	extracellular, golgi	37.36	39.63
Bra030668.1-P	Field mustard	extracellular, golgi	37.36	39.63
AT2G30230.1	Thale cress	extracellular	40.23	39.55
KRH72764	Soybean	extracellular	38.51	39.18
Bra031549.1-P	Field mustard	extracellular, golgi	37.36	38.92
Bra021621.1-P	Field mustard	extracellular	39.08	37.99
Solyc06g007370.1.1	Tomato	extracellular	34.48	37.74
PGSC0003DMT400052957	Potato	extracellular	35.63	37.58
Zm00001d012700_P001	Maize	extracellular	37.36	30.23
Zm00001d043399_P001	Maize	extracellular	33.91	29.8

Protein Annotations

EnsemblPlants:Zm00001d012480_P001	EnsemblPlants:Zm00001d012480_T001	EnsemblPlantsGene:Zm00001d012480	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF14
PFAM:PF14009	ProteinID:AQK99623.1	SEG:seg	UniParc:UPI000220BE10	UniProt:K7VBG9	MapMan:35.2

Description

No Description!

Coordinates

chr8:+:175295472..175295996

Molecular Weight (calculated)

18661.2 Da

IEP (calculated)

10.800

GRAVY (calculated)

-0.457

Length

174 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CMVPCGALDV VRVVHLSGRV DEFSCPVAAA TVLAANPAHT LTTAWSPSGA PGCGSRKLAI VSPDSDLKRG RIYFLIPSAT LPADRRSKKQ
101: SSKRPSQSQS QSQSRLRHHA KKQSAGGTAE QDNYLRELLS EKAASGGGHR RRRSGARVGV WRPRLESIVE EASD

Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.