Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d018045_P001 | |
| Zm00001d037221_P001 | |
| Zm00001d044836_P001 | |
| Zm00001d052256_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G306500.1 | Wheat | cytosol, extracellular | 58.6 | 64.95 |
| Os01t0758500-01 | Rice | cytosol | 58.6 | 64.62 |
| EES03643 | Sorghum | endoplasmic reticulum, extracellular | 62.33 | 64.42 |
| TraesCS3B01G330000.1 | Wheat | cytosol, extracellular | 56.74 | 64.21 |
| TraesCS3D01G295400.1 | Wheat | extracellular | 56.28 | 63.68 |
| Zm00001d043399_P001 | Maize | extracellular | 56.74 | 61.62 |
| HORVU3Hr1G073050.1 | Barley | cytosol, endoplasmic reticulum | 54.88 | 60.51 |
| GSMUA_Achr6P26830_001 | Banana | cytosol, endoplasmic reticulum, plastid | 44.65 | 58.18 |
| GSMUA_Achr4P08040_001 | Banana | extracellular | 45.58 | 57.99 |
| GSMUA_Achr6P22730_001 | Banana | cytosol | 39.53 | 51.52 |
| CDY43324 | Canola | cytosol, endoplasmic reticulum | 40.93 | 50.87 |
| KRH11017 | Soybean | extracellular | 41.4 | 50.57 |
| CDX90174 | Canola | cytosol, endoplasmic reticulum | 40.0 | 50.29 |
| KRH42866 | Soybean | extracellular, plasma membrane | 40.93 | 50.29 |
| GSMUA_Achr7P25280_001 | Banana | extracellular | 40.47 | 50.0 |
| CDX94651 | Canola | cytosol, extracellular | 40.93 | 49.72 |
| Bra030125.1-P | Field mustard | cytosol, extracellular | 40.93 | 49.72 |
| Bra010845.1-P | Field mustard | cytosol, endoplasmic reticulum | 40.47 | 49.43 |
| VIT_10s0003g01310.t01 | Wine grape | extracellular | 41.86 | 49.18 |
| CDY15646 | Canola | cytosol, extracellular | 40.47 | 49.15 |
| KRH58967 | Soybean | cytosol, golgi | 40.0 | 49.14 |
| Solyc02g076800.1.1 | Tomato | extracellular | 41.86 | 47.12 |
| KRH21271 | Soybean | cytosol, nucleus, plastid | 40.93 | 45.13 |
| AT1G29195.1 | Thale cress | cytosol, endoplasmic reticulum | 40.0 | 44.56 |
| Solyc03g006160.1.1 | Tomato | cytosol, extracellular, nucleus | 36.28 | 43.09 |
| PGSC0003DMT400011206 | Potato | extracellular | 36.74 | 41.36 |
| Zm00001d009826_P001 | Maize | extracellular | 26.98 | 39.46 |
| Zm00001d043024_P001 | Maize | extracellular | 31.16 | 39.41 |
| Zm00001d012480_P001 | Maize | extracellular | 30.23 | 37.36 |
| Zm00001d038450_P001 | Maize | vacuole | 29.3 | 35.8 |
| Zm00001d028798_P001 | Maize | extracellular, vacuole | 26.51 | 35.4 |
| Zm00001d039735_P001 | Maize | extracellular | 28.37 | 34.08 |
Protein Annotations
| EnsemblPlants:Zm00001d012700_P001 | EnsemblPlants:Zm00001d012700_T001 | EnsemblPlantsGene:Zm00001d012700 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF3 |
| PFAM:PF14009 | ProteinID:AQL00333.1 | SEG:seg | UniParc:UPI000221D873 | UniProt:K7VPW6 | MapMan:35.2 |
Description
No Description!
Coordinates
chr8:+:178836092..178836739
Molecular Weight (calculated)
22770.4 Da
IEP (calculated)
9.367
GRAVY (calculated)
-0.382
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: METIKCCIAC ILPCGALDVV RIVHSNGRVE EISGGPVLAA EIMKAYPKHV LRKPPSTCPA DAAGIVVHKP VVLPPSAELH KGKIYFLTPV MADATPPAPA
101: PENKPPAASL QPPPPPPPAA QQTASSAART RRRRRKGHTT AAAREGAPAC SSGAGAGART AAGLAPQEGD KERLLDNERY LSEIMKETAS TPRDRRQGRV
201: AVWRPHLESI TEDDL
101: PENKPPAASL QPPPPPPPAA QQTASSAART RRRRRKGHTT AAAREGAPAC SSGAGAGART AAGLAPQEGD KERLLDNERY LSEIMKETAS TPRDRRQGRV
201: AVWRPHLESI TEDDL
001: MKETIRCCIA CILPCGALDV IRIVHSNGHV EEISGTITAS EIMKAHPKHV LKKPSSPTSD HDERDVISAT KIVIVPPEAE LQRGKIYFLM PATKSDKCAG
101: GGKIRREKSN ANAVVKKRSQ YRRQHRDGDE KCNGGESNDV KDKNYEKDLL ISSDRYLTEI LSEKVATQKD RRKGRVGVWR PHLESISEII TED
101: GGKIRREKSN ANAVVKKRSQ YRRQHRDGDE KCNGGESNDV KDKNYEKDLL ISSDRYLTEI LSEKVATQKD RRKGRVGVWR PHLESISEII TED
Arabidopsis Description
At1g29190/F28N24_12 [Source:UniProtKB/TrEMBL;Acc:Q9LP48]
SUBAcon: [endoplasmic reticulum,cytosol]
SUBAcon: [endoplasmic reticulum,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.