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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90174 Canola cytosol, endoplasmic reticulum 59.07 66.67
Bra030125.1-P Field mustard cytosol, extracellular 60.1 65.54
CDX94651 Canola cytosol, extracellular 60.1 65.54
CDY15646 Canola cytosol, extracellular 59.59 64.97
Bra010845.1-P Field mustard cytosol, endoplasmic reticulum 58.55 64.2
CDY43324 Canola cytosol, endoplasmic reticulum 57.51 64.16
KRH11017 Soybean extracellular 53.89 59.09
VIT_10s0003g01310.t01 Wine grape extracellular 54.92 57.92
GSMUA_Achr4P08040_001 Banana extracellular 50.26 57.4
KRH58967 Soybean cytosol, golgi 51.81 57.14
KRH42866 Soybean extracellular, plasma membrane 49.74 54.86
KRH21271 Soybean cytosol, nucleus, plastid 54.92 54.36
Solyc03g006160.1.1 Tomato cytosol, extracellular, nucleus 50.26 53.59
PGSC0003DMT400011206 Potato extracellular 52.85 53.4
GSMUA_Achr6P26830_001 Banana cytosol, endoplasmic reticulum, plastid 45.6 53.33
Solyc02g076800.1.1 Tomato extracellular 52.33 52.88
GSMUA_Achr6P22730_001 Banana cytosol 44.04 51.52
HORVU3Hr1G073050.1 Barley cytosol, endoplasmic reticulum 49.74 49.23
GSMUA_Achr7P25280_001 Banana extracellular 44.04 48.85
TraesCS3A01G306500.1 Wheat cytosol, extracellular 48.7 48.45
TraesCS3B01G330000.1 Wheat cytosol, extracellular 47.15 47.89
TraesCS3D01G295400.1 Wheat extracellular 46.63 47.37
Zm00001d043399_P001 Maize extracellular 48.19 46.97
Os01t0758500-01 Rice cytosol 46.63 46.15
EES03643 Sorghum endoplasmic reticulum, extracellular 46.63 43.27
AT1G06980.1 Thale cress extracellular, golgi 36.27 41.42
Zm00001d012700_P001 Maize extracellular 44.56 40.0
AT2G30230.1 Thale cress extracellular 36.27 39.55
Protein Annotations
MapMan:35.2EntrezGene:839794UniProt:A0A178WPC0ProteinID:AAF88119.1ProteinID:AEE31057.1ArrayExpress:AT1G29195
EnsemblPlantsGene:AT1G29195RefSeq:AT1G29195TAIR:AT1G29195RefSeq:AT1G29195-TAIR-GEnsemblPlants:AT1G29195.1TAIR:AT1G29195.1
EMBL:AY052248EMBL:AY060513EMBL:AY087880InterPro:DUF4228_plantGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152
GO:GO:0009507GO:GO:0009536GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
RefSeq:NP_564323.1ProteinID:OAP19425.1PFAM:PF14009PO:PO:0000013PO:PO:0001054PO:PO:0001185
PO:PO:0007611PO:PO:0007616PO:PO:0009005PO:PO:0009009PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0025022PO:PO:0025281PANTHER:PTHR33052PANTHER:PTHR33052:SF3UniProt:Q9LP48UniParc:UPI00000A293B
Description
At1g29190/F28N24_12 [Source:UniProtKB/TrEMBL;Acc:Q9LP48]
Coordinates
chr1:-:10202414..10203491
Molecular Weight (calculated)
21647.0 Da
IEP (calculated)
9.031
GRAVY (calculated)
-0.675
Length
193 amino acids
Sequence
(BLAST)
001: MKETIRCCIA CILPCGALDV IRIVHSNGHV EEISGTITAS EIMKAHPKHV LKKPSSPTSD HDERDVISAT KIVIVPPEAE LQRGKIYFLM PATKSDKCAG
101: GGKIRREKSN ANAVVKKRSQ YRRQHRDGDE KCNGGESNDV KDKNYEKDLL ISSDRYLTEI LSEKVATQKD RRKGRVGVWR PHLESISEII TED
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.