CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84850	Canola	extracellular	91.14	91.14
CDX84851	Canola	extracellular	91.14	91.14
Bra022784.1-P	Field mustard	extracellular	94.3	84.66
CDX97836	Canola	extracellular	81.65	80.12
CDY02050	Canola	extracellular	79.11	78.12
CDY29687	Canola	extracellular	81.65	72.07
AT2G30230.1	Thale cress	extracellular	75.95	67.8
CDY15595	Canola	extracellular, golgi	69.62	67.07
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	61.39	65.54
CDY09944	Canola	extracellular, golgi	66.46	62.87
CDY10237	Canola	extracellular, golgi	67.09	62.72
CDY54890	Canola	extracellular, golgi	65.82	61.54
CDX86506	Canola	extracellular, golgi	65.19	61.31
KRH17122	Soybean	extracellular, golgi	61.39	58.08
KRH30160	Soybean	extracellular	60.13	56.89
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	50.63	56.74
KRG98199	Soybean	extracellular	58.23	55.76
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	48.1	54.68
GSMUA_Achr5P29500_001	Banana	extracellular, vacuole	49.37	53.42
GSMUA_Achr11P...	Banana	cytosol, extracellular	48.1	53.15
Solyc06g007370.1.1	Tomato	extracellular	53.16	52.83
KRH72764	Soybean	extracellular	56.33	52.05
PGSC0003DMT400052957	Potato	extracellular	53.8	51.52
Zm00001d009826_P001	Maize	extracellular	46.84	50.34
TraesCS1B01G131700.1	Wheat	extracellular	53.8	50.0
TraesCS1A01G111500.1	Wheat	extracellular	53.8	50.0
TraesCS1D01G112900.1	Wheat	extracellular	53.16	49.41
EES17778	Sorghum	extracellular, golgi	53.16	48.84
GSMUA_Achr11P...	Banana	cytosol	50.0	47.59
TraesCS4D01G190800.1	Wheat	extracellular	50.63	47.06
Zm00001d028798_P001	Maize	extracellular, vacuole	47.47	46.58
HORVU4Hr1G055090.1	Barley	extracellular	50.0	46.47
TraesCS4B01G189400.1	Wheat	extracellular, vacuole	50.0	46.47
EER95013	Sorghum	extracellular, vacuole	48.73	46.11
Os05t0165200-00	Rice	extracellular	49.37	45.88
TraesCS4A01G114800.1	Wheat	extracellular	48.1	44.19
Os03t0298100-00	Rice	cytosol, extracellular	49.37	43.82
Zm00001d039735_P001	Maize	extracellular	49.37	43.58
TraesCS3A01G098800.1	Wheat	extracellular	46.84	43.53
TraesCS3D01G099200.1	Wheat	extracellular	46.2	43.45
Os01t0165600-00	Rice	extracellular, golgi, mitochondrion, nucleus	45.57	42.35
TraesCS3B01G115000.1	Wheat	extracellular	44.94	42.01
CDX90174	Canola	cytosol, endoplasmic reticulum	44.94	41.52
Os01t0826800-01	Rice	vacuole	44.94	41.52
EES02407	Sorghum	extracellular, golgi, plasma membrane	48.1	41.3
CDY43324	Canola	cytosol, endoplasmic reticulum	44.94	41.04
GSMUA_Achr9P04640_001	Banana	extracellular	39.24	40.79
Os05t0474700-01	Rice	extracellular	43.04	39.77
Zm00001d043024_P001	Maize	extracellular	41.77	38.82
TraesCS1B01G307800.1	Wheat	extracellular, vacuole	43.04	38.42
CDX94651	Canola	cytosol, extracellular	43.04	38.42
EES18380	Sorghum	extracellular	44.94	38.17
TraesCS1A01G298300.1	Wheat	extracellular, vacuole	42.41	37.85
EES03819	Sorghum	extracellular	42.41	37.85
TraesCS1D01G292900.1	Wheat	extracellular	41.77	37.71
CDY15646	Canola	cytosol, extracellular	41.77	37.29
Zm00001d038450_P001	Maize	vacuole	41.14	36.93
TraesCS3B01G379600.1	Wheat	extracellular	37.97	36.81
Zm00001d012480_P001	Maize	extracellular	40.51	36.78
TraesCS3A01G347700.1	Wheat	extracellular	37.34	35.12
TraesCS3D01G341300.1	Wheat	extracellular	36.71	34.94
Os04t0630700-01	Rice	cytosol	17.72	25.93

Protein Annotations

EnsemblPlants:CDY24020	EnsemblPlantsGene:GSBRNA2T00024540001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26	PFAM:PF14009
ProteinID:CDY24020	ProteinID:CDY24020.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0004EE452B	UniProt:A0A078GC39
MapMan:35.2	:	:	:	:	:

Description

BnaC03g16710DBnaC03g16710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GC39]

Coordinates

chrLK032152:-:500196..500720

Molecular Weight (calculated)

17758.7 Da

IEP (calculated)

8.842

GRAVY (calculated)

-0.318

Length

158 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITRTMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSLPEKK KTKKKKEAQR
101: RKKSPENAND IKIHHMVSTS KDLDLTLCEK YFEDVMLSSH SRSGSLWQPQ LASIFEDF

Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.