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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97836 Canola extracellular 88.83 98.76
Bra021621.1-P Field mustard extracellular 91.06 91.06
CDY02050 Canola extracellular 77.09 86.25
CDY24020 Canola extracellular 72.07 81.65
CDX84850 Canola extracellular 71.51 81.01
CDX84851 Canola extracellular 71.51 81.01
AT2G30230.1 Thale cress extracellular 76.54 77.4
CDY15595 Canola extracellular, golgi 64.8 70.73
CDY54890 Canola extracellular, golgi 64.8 68.64
CDY09944 Canola extracellular, golgi 63.69 68.26
VIT_06s0004g07460.t01 Wine grape extracellular, golgi 56.42 68.24
CDY10237 Canola extracellular, golgi 64.25 68.05
CDX86506 Canola extracellular, golgi 62.01 66.07
GSMUA_Achr6P32750_001 Banana extracellular, vacuole 47.49 60.28
KRH17122 Soybean extracellular, golgi 55.31 59.28
KRH30160 Soybean extracellular 55.31 59.28
KRG98199 Soybean extracellular 52.51 56.97
GSMUA_Achr5P29500_001 Banana extracellular, vacuole 46.37 56.85
GSMUA_Achr11P... Banana cytosol, extracellular 45.25 56.64
GSMUA_Achr5P28030_001 Banana cytosol, extracellular 43.58 56.12
Solyc06g007370.1.1 Tomato extracellular 49.72 55.97
PGSC0003DMT400052957 Potato extracellular 50.84 55.15
Zm00001d009826_P001 Maize extracellular 44.69 54.42
EES17778 Sorghum extracellular, golgi 50.28 52.33
KRH72764 Soybean extracellular 49.72 52.05
GSMUA_Achr11P... Banana cytosol 47.49 51.2
TraesCS1D01G112900.1 Wheat extracellular 48.04 50.59
TraesCS1B01G131700.1 Wheat extracellular 48.04 50.59
TraesCS1A01G111500.1 Wheat extracellular 48.04 50.59
EER95013 Sorghum extracellular, vacuole 46.37 49.7
TraesCS4D01G190800.1 Wheat extracellular 46.93 49.41
Os05t0165200-00 Rice extracellular 46.93 49.41
Zm00001d028798_P001 Maize extracellular, vacuole 44.13 49.07
HORVU4Hr1G055090.1 Barley extracellular 46.37 48.82
TraesCS4B01G189400.1 Wheat extracellular, vacuole 46.37 48.82
TraesCS4A01G114800.1 Wheat extracellular 45.25 47.09
Os03t0298100-00 Rice cytosol, extracellular 45.81 46.07
Os01t0826800-01 Rice vacuole 43.02 45.03
Zm00001d043024_P001 Maize extracellular 41.9 44.12
Os01t0165600-00 Rice extracellular, golgi, mitochondrion, nucleus 41.9 44.12
GSMUA_Achr9P04640_001 Banana extracellular 37.43 44.08
CDX90174 Canola cytosol, endoplasmic reticulum 41.34 43.27
Os05t0474700-01 Rice extracellular 40.78 42.69
Zm00001d039735_P001 Maize extracellular 42.46 42.46
EES02407 Sorghum extracellular, golgi, plasma membrane 43.58 42.39
TraesCS3A01G098800.1 Wheat extracellular 40.22 42.35
TraesCS3D01G099200.1 Wheat extracellular 39.66 42.26
CDY43324 Canola cytosol, endoplasmic reticulum 40.78 42.2
EES18380 Sorghum extracellular 43.58 41.94
EES03819 Sorghum extracellular 41.34 41.81
TraesCS3B01G379600.1 Wheat extracellular 37.99 41.72
TraesCS1D01G292900.1 Wheat extracellular 40.22 41.14
Zm00001d038450_P001 Maize vacuole 40.22 40.91
Zm00001d012480_P001 Maize extracellular 39.66 40.8
TraesCS1B01G307800.1 Wheat extracellular, vacuole 40.22 40.68
TraesCS3B01G115000.1 Wheat extracellular 37.99 40.24
TraesCS3A01G347700.1 Wheat extracellular 37.43 39.88
TraesCS1A01G298300.1 Wheat extracellular, vacuole 39.11 39.55
CDX94651 Canola cytosol, extracellular 39.11 39.55
TraesCS3D01G341300.1 Wheat extracellular 35.75 38.55
CDY15646 Canola cytosol, extracellular 37.99 38.42
Os04t0630700-01 Rice cytosol 16.2 26.85
Protein Annotations
EnsemblPlants:CDY29687EnsemblPlantsGene:GSBRNA2T00043458001InterPro:DUF4228_plantPANTHER:PTHR33052PANTHER:PTHR33052:SF26PFAM:PF14009
ProteinID:CDY29687ProteinID:CDY29687.1SEG:segSignalP:SignalP-noTMUniParc:UPI0004EE4F04UniProt:A0A078GWW9
MapMan:35.2:::::
Description
BnaA04g17400DBnaA04g17400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWW9]
Coordinates
chrLK032241:-:320687..321226
Molecular Weight (calculated)
20126.3 Da
IEP (calculated)
9.146
GRAVY (calculated)
-0.582
Length
179 amino acids
Sequence
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITRPMTAG EILQANPNHV LSKPCSQGVV RKILVLSPES ELKRGSIYFL IPDTSLPEKK KTKNKKDHPR
101: RKKPLENANN ITSDHHTVSS INKDLDLTLC EKYLEDVMLS SSEKNCSAGK ENRHRRRHSR SASVSMWRPH LDSISEDLN
Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN
Arabidopsis Description
6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.