CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031549.1-P	Field mustard	extracellular, golgi	98.2	98.2
AT1G06980.1	Thale cress	extracellular, golgi	81.44	80.47
CDY54890	Canola	extracellular, golgi	79.64	78.7
CDX86506	Canola	extracellular, golgi	76.65	76.19
CDY10237	Canola	extracellular, golgi	75.45	74.56
CDY02050	Canola	extracellular	68.26	71.25
CDX97836	Canola	extracellular	68.26	70.81
CDY15595	Canola	extracellular, golgi	68.86	70.12
CDX84851	Canola	extracellular	63.47	67.09
CDX84850	Canola	extracellular	63.47	67.09
CDY24020	Canola	extracellular	62.87	66.46
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	56.89	64.19
CDY29687	Canola	extracellular	68.26	63.69
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	50.3	59.57
KRH30160	Soybean	extracellular	58.68	58.68
KRH17122	Soybean	extracellular, golgi	58.08	58.08
Solyc06g007370.1.1	Tomato	extracellular	54.49	57.23
GSMUA_Achr5P29500_001	Banana	extracellular, vacuole	49.7	56.85
KRG98199	Soybean	extracellular	55.09	55.76
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	46.11	55.4
GSMUA_Achr11P...	Banana	cytosol, extracellular	46.71	54.55
Zm00001d009826_P001	Maize	extracellular	47.9	54.42
KRH72764	Soybean	extracellular	55.69	54.39
PGSC0003DMT400052957	Potato	extracellular	53.29	53.94
TraesCS1D01G112900.1	Wheat	extracellular	52.69	51.76
EES17778	Sorghum	extracellular, golgi	52.69	51.16
TraesCS1B01G131700.1	Wheat	extracellular	51.5	50.59
TraesCS1A01G111500.1	Wheat	extracellular	51.5	50.59
GSMUA_Achr11P...	Banana	cytosol	49.1	49.4
Zm00001d028798_P001	Maize	extracellular, vacuole	46.71	48.45
EER95013	Sorghum	extracellular, vacuole	47.9	47.9
Os03t0298100-00	Rice	cytosol, extracellular	50.9	47.75
Os05t0165200-00	Rice	extracellular	48.5	47.65
HORVU4Hr1G055090.1	Barley	extracellular	48.5	47.65
TraesCS4D01G190800.1	Wheat	extracellular	47.9	47.06
TraesCS4A01G114800.1	Wheat	extracellular	47.9	46.51
TraesCS4B01G189400.1	Wheat	extracellular, vacuole	47.31	46.47
GSMUA_Achr9P04640_001	Banana	extracellular	41.92	46.05
Os01t0165600-00	Rice	extracellular, golgi, mitochondrion, nucleus	46.11	45.29
EES02407	Sorghum	extracellular, golgi, plasma membrane	48.5	44.02
Os01t0826800-01	Rice	vacuole	44.31	43.27
Zm00001d039735_P001	Maize	extracellular	46.11	43.02
TraesCS3B01G115000.1	Wheat	extracellular	42.52	42.01
CDX94651	Canola	cytosol, extracellular	44.31	41.81
TraesCS3A01G098800.1	Wheat	extracellular	42.52	41.76
TraesCS3D01G099200.1	Wheat	extracellular	41.92	41.67
CDY43324	Canola	cytosol, endoplasmic reticulum	43.11	41.62
EES03819	Sorghum	extracellular	43.71	41.24
CDY15646	Canola	cytosol, extracellular	43.11	40.68
CDX90174	Canola	cytosol, endoplasmic reticulum	41.32	40.35
TraesCS1B01G307800.1	Wheat	extracellular, vacuole	41.92	39.55
Zm00001d043024_P001	Maize	extracellular	40.12	39.41
TraesCS3B01G379600.1	Wheat	extracellular	38.32	39.26
Os05t0474700-01	Rice	extracellular	40.12	39.18
TraesCS1A01G298300.1	Wheat	extracellular, vacuole	41.32	38.98
TraesCS1D01G292900.1	Wheat	extracellular	40.72	38.86
TraesCS3D01G341300.1	Wheat	extracellular	38.32	38.55
Zm00001d012480_P001	Maize	extracellular	40.12	38.51
EES18380	Sorghum	extracellular	42.52	38.17
TraesCS3A01G347700.1	Wheat	extracellular	38.32	38.1
Zm00001d038450_P001	Maize	vacuole	40.12	38.07
Os04t0630700-01	Rice	cytosol	19.16	29.63

Protein Annotations

EnsemblPlants:CDY09944	EnsemblPlantsGene:GSBRNA2T00031715001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26	PFAM:PF14009
ProteinID:CDY09944	ProteinID:CDY09944.1	SEG:seg	UniParc:UPI0004EDC268	UniProt:A0A078FA99	MapMan:35.2

Description

BnaC08g45070DBnaC08g45070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA99]

Coordinates

chrLK032000:+:190507..191010

Molecular Weight (calculated)

18686.3 Da

IEP (calculated)

9.118

GRAVY (calculated)

-0.566

Length

167 amino acids

Sequence
(BLAST)

001: MGNSLRCCIA CVLPCGALDL IRIVHLNGHV QEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDSHRQS
101: KTLNNSPSVD APKDDDQSVK LCAEKYLEEV VSSTSTSKEH RHRRRHSRSA SVSTWQPHLD SISEDLN

Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.