Factsheet for Os05t0165200-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	mitochondrion, nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009826_P001	Maize	extracellular	60.59	70.07
EES17778	Sorghum	extracellular, golgi	68.82	68.02
TraesCS1B01G131700.1	Wheat	extracellular	66.47	66.47
TraesCS1D01G112900.1	Wheat	extracellular	65.88	65.88
TraesCS1A01G111500.1	Wheat	extracellular	65.88	65.88
GSMUA_Achr6P32750_001	Banana	extracellular, vacuole	50.0	60.28
VIT_06s0004g07460.t01	Wine grape	extracellular, golgi	51.76	59.46
GSMUA_Achr11P...	Banana	cytosol, extracellular	48.82	58.04
GSMUA_Achr5P28030_001	Banana	cytosol, extracellular	45.29	55.4
KRH30160	Soybean	extracellular	53.53	54.49
Solyc06g007370.1.1	Tomato	extracellular	50.0	53.46
Os01t0165600-00	Rice	extracellular, golgi, mitochondrion, nucleus	51.76	51.76
PGSC0003DMT400052957	Potato	extracellular	50.0	51.52
KRH17122	Soybean	extracellular, golgi	50.0	50.9
CDY02050	Canola	extracellular	47.65	50.62
KRG98199	Soybean	extracellular	48.82	50.3
CDY54890	Canola	extracellular, golgi	50.0	50.3
AT1G06980.1	Thale cress	extracellular, golgi	50.0	50.3
Bra015540.1-P	Field mustard	extracellular, golgi	49.41	49.7
CDY10237	Canola	extracellular, golgi	49.41	49.7
CDX97836	Canola	extracellular	47.06	49.69
CDX84851	Canola	extracellular	45.88	49.37
CDY24020	Canola	extracellular	45.88	49.37
CDX84850	Canola	extracellular	45.88	49.37
Bra031549.1-P	Field mustard	extracellular, golgi	47.65	48.5
CDY09944	Canola	extracellular, golgi	47.65	48.5
Bra030668.1-P	Field mustard	extracellular, golgi	46.47	48.17
CDY15595	Canola	extracellular, golgi	46.47	48.17
Bra018326.1-P	Field mustard	extracellular	50.0	47.75
AT2G30230.1	Thale cress	extracellular	49.41	47.46
KRH72764	Soybean	extracellular	47.65	47.37
Os01t0826800-01	Rice	vacuole	47.65	47.37
CDY29687	Canola	extracellular	49.41	46.93
Bra022784.1-P	Field mustard	extracellular	48.24	46.59
CDX86506	Canola	extracellular, golgi	45.88	46.43
Bra021621.1-P	Field mustard	extracellular	48.82	46.37
GSMUA_Achr9P04640_001	Banana	extracellular	40.59	45.39
Os05t0474700-01	Rice	extracellular	45.29	45.03
Os03t0298100-00	Rice	cytosol, extracellular	47.06	44.94
Os04t0630700-01	Rice	cytosol	25.29	39.81
Os01t0758500-01	Rice	cytosol	42.94	37.44

Protein Annotations

EnsemblPlants:Os05t0165200-00	EnsemblPlantsGene:Os05g0165200	EntrezGene:4337910	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF26
PFAM:PF14009	ProteinID:AAT69629.1	ProteinID:BAS92437.1	RefSeq:XP_015638791.1	SEG:seg	SignalP:SignalP-noTM
UniParc:UPI00003BF5A9	UniProt:Q6F2T0	MapMan:35.2	:	:	:

Description

Similar to predicted protein. (Os05t0165200-00)

Coordinates

chr5:+:3832980..3833802

Molecular Weight (calculated)

17970.5 Da

IEP (calculated)

10.054

GRAVY (calculated)

-0.326

Length

170 amino acids

Sequence
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGRV EEYGRPVAAG EILAANPNHV LSKPCCSQGG AVAVRRTILI VSPDSELERG EIYFLIPASS VPDKKKKSGG
101: GAAAATPAAS GRHGKSKQAA PSSDHGGNGR RHVRDVSSEK RSSSLHRRRM SAGSRTAAWR PHLECIVEDT

Best Arabidopsis Sequence Match ( AT2G30230.1 )
(BLAST)

001: MGNSLRCCLA CVLPCGALDL IRIVHLNGHV DEITSPMTAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDTSMPEKK KTKKRKELRC
101: RKKPLESGND INSDHVSTNK DLDGHCLTLC EKYLEDVMLS EKMSSAGKEN RHRRKHSRSA SVSTWRPHLD SITEDLN

Arabidopsis Description

6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:O22919]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.