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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY54890 Canola extracellular, golgi 82.84 82.84
CDY10237 Canola extracellular, golgi 76.33 76.33
AT1G06980.1 Thale cress extracellular, golgi 70.41 70.41
Bra018326.1-P Field mustard extracellular 72.78 69.1
VIT_06s0004g07460.t01 Wine grape extracellular, golgi 60.35 68.92
Bra030668.1-P Field mustard extracellular, golgi 66.27 68.29
Bra031549.1-P Field mustard extracellular, golgi 66.86 67.66
Bra021621.1-P Field mustard extracellular 68.05 64.25
KRG98199 Soybean extracellular 61.54 63.03
GSMUA_Achr6P32750_001 Banana extracellular, vacuole 51.48 61.7
Bra022784.1-P Field mustard extracellular 63.91 61.36
GSMUA_Achr5P29500_001 Banana extracellular, vacuole 51.48 59.59
KRH30160 Soybean extracellular 58.58 59.28
KRH17122 Soybean extracellular, golgi 57.4 58.08
Solyc06g007370.1.1 Tomato extracellular 53.85 57.23
GSMUA_Achr5P28030_001 Banana cytosol, extracellular 46.75 56.83
GSMUA_Achr11P... Banana cytosol, extracellular 47.34 55.94
Zm00001d009826_P001 Maize extracellular 48.52 55.78
PGSC0003DMT400052957 Potato extracellular 53.25 54.55
KRH72764 Soybean extracellular 55.03 54.39
GSMUA_Achr11P... Banana cytosol 50.89 51.81
EER95013 Sorghum extracellular, vacuole 50.3 50.9
TraesCS1D01G112900.1 Wheat extracellular 50.89 50.59
Zm00001d028798_P001 Maize extracellular, vacuole 47.93 50.31
TraesCS1B01G131700.1 Wheat extracellular 49.7 49.41
TraesCS1A01G111500.1 Wheat extracellular 49.7 49.41
Os05t0165200-00 Rice extracellular 49.7 49.41
EES17778 Sorghum extracellular, golgi 49.7 48.84
HORVU4Hr1G055090.1 Barley extracellular 47.34 47.06
TraesCS4D01G190800.1 Wheat extracellular 47.34 47.06
TraesCS4B01G189400.1 Wheat extracellular, vacuole 46.75 46.47
TraesCS4A01G114800.1 Wheat extracellular 46.15 45.35
Os03t0298100-00 Rice cytosol, extracellular 47.34 44.94
GSMUA_Achr9P04640_001 Banana extracellular 40.24 44.74
Os01t0826800-01 Rice vacuole 43.79 43.27
Zm00001d039735_P001 Maize extracellular 45.56 43.02
Bra030125.1-P Field mustard cytosol, extracellular 44.97 42.94
Os01t0165600-00 Rice extracellular, golgi, mitochondrion, nucleus 42.6 42.35
EES03819 Sorghum extracellular 43.79 41.81
TraesCS3D01G099200.1 Wheat extracellular 41.42 41.67
Zm00001d043024_P001 Maize extracellular 41.42 41.18
TraesCS3A01G098800.1 Wheat extracellular 41.42 41.18
Os05t0474700-01 Rice extracellular 41.42 40.94
EES02407 Sorghum extracellular, golgi, plasma membrane 44.38 40.76
TraesCS1B01G307800.1 Wheat extracellular, vacuole 42.6 40.68
TraesCS3B01G115000.1 Wheat extracellular 40.24 40.24
TraesCS1D01G292900.1 Wheat extracellular 41.42 40.0
EES18380 Sorghum extracellular 43.79 39.78
Bra010845.1-P Field mustard cytosol, endoplasmic reticulum 41.42 39.77
TraesCS1A01G298300.1 Wheat extracellular, vacuole 41.42 39.55
TraesCS3D01G341300.1 Wheat extracellular 38.46 39.16
TraesCS3B01G379600.1 Wheat extracellular 37.28 38.65
Zm00001d038450_P001 Maize vacuole 40.24 38.64
Zm00001d012480_P001 Maize extracellular 39.65 38.51
TraesCS3A01G347700.1 Wheat extracellular 37.28 37.5
Os04t0630700-01 Rice cytosol 16.57 25.93
Protein Annotations
EnsemblPlants:Bra015540.1EnsemblPlants:Bra015540.1-PEnsemblPlantsGene:Bra015540InterPro:DUF4228_plantPANTHER:PTHR33052PANTHER:PTHR33052:SF26
PFAM:PF14009SEG:segSignalP:SignalP-noTMUniParc:UPI0002544F4DUniProt:M4DGB7MapMan:35.2
Description
AT1G06980 (E=6e-067) | unknown protein
Coordinates
chrA10:+:1166535..1167044
Molecular Weight (calculated)
18962.8 Da
IEP (calculated)
9.131
GRAVY (calculated)
-0.551
Length
169 amino acids
Sequence
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDGHNRP
101: KKILINKPSA DAGDVKEDDE CAKLCEKYLE EVVSSRSSGK EHRHRRRHSR SASVSTWRPH LDSISEDVN
Best Arabidopsis Sequence Match ( AT1G06980.1 )
(BLAST)
001: MGNSLRCCLA CVLPCGALDL IRIVHLNGYV EEITRSITAG EILQANPNHV LSKPCSQGVV RKILILSPES ELKRGSIYFL IPDSSLPEKK RRRKDTPRRK
101: KNLQNPSADA AGREIKGDEE CVKLCEKYLE EVVSSASTGK EHRHRRRHSR SASVSTWRPL LDSISEDLN
Arabidopsis Description
6,7-dimethyl-8-ribityllumazine synthase [Source:UniProtKB/TrEMBL;Acc:Q9LMJ2]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.