Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13586 | Canola | cytosol | 96.25 | 94.96 |
| CDY69424 | Canola | cytosol | 85.52 | 94.54 |
| AT1G13320.1 | Thale cress | cytosol | 92.84 | 92.84 |
| PGSC0003DMT400033762 | Potato | cytosol | 92.84 | 92.84 |
| Solyc05g009600.2.1 | Tomato | plastid | 92.84 | 92.84 |
| KXG19189 | Sorghum | cytosol | 90.12 | 90.12 |
| HORVU5Hr1G051850.3 | Barley | cytosol | 89.61 | 89.61 |
| TraesCS5D01G172700.4 | Wheat | cytosol | 89.61 | 89.61 |
| TraesCS5B01G165200.3 | Wheat | cytosol, golgi | 89.61 | 89.61 |
| TraesCS5A01G168400.5 | Wheat | cytosol | 89.61 | 89.61 |
| Zm00001d036031_P001 | Maize | cytosol | 89.44 | 89.44 |
| Zm00001d045482_P001 | Maize | cytosol | 89.1 | 89.1 |
| KRH32720 | Soybean | cytosol | 15.84 | 86.92 |
| KXG20320 | Sorghum | cytosol | 86.71 | 86.71 |
| AT1G25490.1 | Thale cress | cytosol | 86.71 | 86.56 |
| Zm00001d046506_P002 | Maize | cytosol | 86.2 | 85.04 |
| PGSC0003DMT400041039 | Potato | cytosol | 45.83 | 84.59 |
| Solyc04g007100.2.1 | Tomato | cytosol | 75.47 | 84.38 |
| PGSC0003DMT400041034 | Potato | cytosol | 35.09 | 77.44 |
| VIT_00s2436g00010.t01 | Wine grape | cytosol | 10.39 | 76.25 |
| VIT_00s2496g00010.t01 | Wine grape | cytosol | 10.9 | 75.29 |
| VIT_01s0011g00330.t01 | Wine grape | cytosol | 10.73 | 74.12 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.15 | 73.14 |
| Solyc05g045950.1.1 | Tomato | cytosol | 19.59 | 64.61 |
| CDY49184 | Canola | mitochondrion | 10.05 | 35.76 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:13.4.1.2.4 | MapMan:18.4.24.1.2.1 | EntrezGene:822171 | UniProt:A0A178VIW5 | ProteinID:AEE77069.1 |
| ProteinID:ANM64959.1 | InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT3G25800 | EnsemblPlantsGene:AT3G25800 | RefSeq:AT3G25800 |
| TAIR:AT3G25800 | RefSeq:AT3G25800-TAIR-G | EnsemblPlants:AT3G25800.3 | Unigene:At.159 | ProteinID:BAA95767.1 | EMBL:BT002488 |
| EMBL:BT008356 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005829 | GO:GO:0005886 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0042325 | GO:GO:0046686 |
| InterPro:HEAT | InterPro:HEAT_type_2 | InterPro:IPR011989 | InterPro:IPR021133 | RefSeq:NP_001326959.1 | RefSeq:NP_189208.1 |
| ProteinID:OAP05421.1 | Symbol:PDF1 | PFAM:PF02985 | PFAM:PF13646 | PFscan:PS50077 | PANTHER:PTHR10648 |
| PANTHER:PTHR10648:SF20 | UniProt:Q38950 | SUPFAM:SSF48371 | UniParc:UPI00000AC639 | EMBL:X82002 | : |
Description
PP2AA2Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38950]
Coordinates
chr3:-:9422588..9426047
Molecular Weight (calculated)
65602.0 Da
IEP (calculated)
4.767
GRAVY (calculated)
0.106
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMIDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEYAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRVPNI KFNVAKVLQS LIPIVDQSVV EKTIRPGLVE LSEDPDVDVR FFANQALQSI DNVMMSS
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRVPNI KFNVAKVLQS LIPIVDQSVV EKTIRPGLVE LSEDPDVDVR FFANQALQSI DNVMMSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.