CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32720	Soybean	cytosol	18.08	89.72
CDY13586	Canola	cytosol	98.49	87.9
CDY04182	Canola	cytosol	21.47	87.69
AT3G25800.3	Thale cress	cytosol	94.54	85.52
CDY39185	Canola	cytosol	73.82	84.67
Solyc05g009600.2.1	Tomato	plastid	90.77	82.11
PGSC0003DMT400033762	Potato	cytosol	90.77	82.11
CDX84994	Canola	mitochondrion	18.08	80.67
CDY24398	Canola	extracellular, vacuole	12.05	79.01
CDY24399	Canola	endoplasmic reticulum	2.64	77.78
VIT_00s2496g00010.t01	Wine grape	cytosol	12.43	77.65
CDY36104	Canola	cytosol	85.88	77.55
VIT_00s2436g00010.t01	Wine grape	cytosol	11.68	77.5
CDY51132	Canola	cytosol	85.31	77.3
PGSC0003DMT400041034	Potato	cytosol	38.42	76.69
CDY42101	Canola	cytosol	84.93	76.57
VIT_01s0011g00330.t01	Wine grape	cytosol	12.24	76.47
PGSC0003DMT400041039	Potato	cytosol	45.76	76.42
Solyc04g007100.2.1	Tomato	cytosol	73.63	74.48
CDY24397	Canola	cytosol	55.93	71.91
GSMUA_AchrUn_...	Banana	cytosol	32.58	71.49
CDY03849	Canola	cytosol	70.06	70.32
CDY04181	Canola	endoplasmic reticulum	43.31	66.28
CDX84993	Canola	plasma membrane	42.18	53.08
CDX87453	Canola	cytosol	12.62	43.51
CDY31621	Canola	endoplasmic reticulum, extracellular	12.05	40.25
CDY70440	Canola	cytosol	11.3	38.71
Solyc05g045950.1.1	Tomato	cytosol	12.05	35.96
CDY35849	Canola	plasma membrane	8.29	32.59
CDX84995	Canola	cytosol	11.49	32.45
CDY49184	Canola	mitochondrion	9.6	30.91
CDX70737	Canola	cytosol	4.9	21.85
CDY66919	Canola	cytosol	12.43	17.6
CDY13585	Canola	cytosol, endoplasmic reticulum, golgi	10.36	12.82

Protein Annotations

Gene3D:1.25.10.10	MapMan:13.4.1.2.4	MapMan:18.4.24.1.2.1	UniProt:A0A078JRJ1	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY69424	ProteinID:CDY69424	ProteinID:CDY69424.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00087744001	InterPro:HEAT	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133	PFAM:PF02985
PFAM:PF13646	PFscan:PS50077	PANTHER:PTHR10648	PANTHER:PTHR10648:SF20	SUPFAM:SSF48371	UniParc:UPI0004EDFADD

Description

BnaAnng30450DBnaAnng30450D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JRJ1]

Coordinates

chrLK039404:-:3..3618

Molecular Weight (calculated)

59271.4 Da

IEP (calculated)

4.916

GRAVY (calculated)

0.110

Length

531 amino acids

Sequence
(BLAST)

001: MSMTEEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEHAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMKET DLVEHFIPLV KRLAAGEWFT ARVSACGVFH IAYPSAPDAV KTELRSIYTQ LCQDDMPMVR RAAATNLGKF AATIESAHLK
201: TDVMSMFDDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVA HILPVIVNFS QQDKSWRVRY MVANQLYELC EAVGPEPTRT ELVPAYVRLL RDNEAEVRIA
301: AAGKVTKFCR ILNPELAIQH ILPCVKELST DSSQHVRSAL ASVIMGMAPV LGKDATIEHL LPIFLSLLKD EFPDVRLNII SKLDQVNQVI GIDLLSQSLL
401: PAIVELAEDR HWRVRLAIIE YIPLLASQLG VGFFDDKLGA LCMQWLQDKV HSIREAAANN VKRLAEEFGP EWAMQHIVPQ VLEMISNPHY LYRMTILRAV
501: SLLAPVMGSE ITCSKLLPVV MTGAKDRQVL I

Best Arabidopsis Sequence Match ( AT3G25800.2 )
(BLAST)

001: MSMIDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEYAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRQFQT SNSTSLKYFN PSFQ

Arabidopsis Description

PP2AA2Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.