Factsheet for PGSC0003DMT400033762

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400011206
PGSC0003DMT400019235
PGSC0003DMT400044093

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13320.1	PGSC0003DMT400011206	AT1G29195.1	21798944
AT1G13320.1	PGSC0003DMT400044093	AT3G08780.1	21798944
AT1G13320.1	PGSC0003DMT400019235	AT3G54850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g009600.2.1	Tomato	plastid	99.66	99.66
AT3G25800.3	Thale cress	cytosol	92.84	92.84
KRG90789	Soybean	endoplasmic reticulum, nucleus	91.14	91.45
KRH35974	Soybean	endoplasmic reticulum, nucleus	90.8	91.11
CDY69424	Canola	cytosol	82.11	90.77
CDY13586	Canola	cytosol	91.65	90.42
CDY39185	Canola	cytosol	71.21	90.28
PGSC0003DMT400010375	Potato	cytosol	88.76	89.67
AT1G13320.1	Thale cress	cytosol	89.44	89.44
KRH70562	Soybean	endoplasmic reticulum	88.76	88.76
Bra017348.1-P	Field mustard	cytosol	38.33	86.87
CDY04182	Canola	cytosol	19.08	86.15
KRH32720	Soybean	cytosol	15.67	85.98
PGSC0003DMT400041039	Potato	cytosol	46.0	84.91
PGSC0003DMT400041034	Potato	cytosol	36.8	81.2
CDY04181	Canola	endoplasmic reticulum	46.34	78.39
VIT_00s2436g00010.t01	Wine grape	cytosol	10.56	77.5
VIT_00s2496g00010.t01	Wine grape	cytosol	11.07	76.47
VIT_01s0011g00330.t01	Wine grape	cytosol	10.9	75.29
GSMUA_AchrUn_...	Banana	cytosol	30.32	73.55
PGSC0003DMT400044033	Potato	mitochondrion	6.98	56.94
Bra025162.1-P	Field mustard	cytosol	60.65	46.23
CDY49184	Canola	mitochondrion	10.05	35.76

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:102591082	MapMan:13.4.1.2.4	MapMan:18.4.24.1.2.1	InterPro:ARM-like	InterPro:ARM-type_fold
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005886	GO:GO:0006464	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009723	GO:GO:0009789
GO:GO:0009926	GO:GO:0009987	GO:GO:0010119	GO:GO:0016020	GO:GO:0019538	GO:GO:0030312
GO:GO:0035304	InterPro:HEAT	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133	UniProt:M1AZM2
PFAM:PF02985	PFAM:PF13646	EnsemblPlantsGene:PGSC0003DMG400012971	PGSC:PGSC0003DMG400012971	EnsemblPlants:PGSC0003DMT400033762	PFscan:PS50077
PANTHER:PTHR10648	PANTHER:PTHR10648:SF20	SUPFAM:SSF48371	UniParc:UPI000294A47C	RefSeq:XP_006362557.1	:

Description

Protein phosphatase 2A [Source:PGSC_GENE;Acc:PGSC0003DMG400012971]

Coordinates

chr5:-:2223501..2230860

Molecular Weight (calculated)

65464.8 Da

IEP (calculated)

4.683

GRAVY (calculated)

0.136

Length

587 amino acids

Sequence
(BLAST)

001: MAMVDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEHAHVLLPP LETLCTVEET
101: CVRDKAVESL CRIGSQMRES DLVDWFVPLV KRLAAGEWFT ARVSACGLFH IAYSSAPEML KAELRSIYSQ LCQDDMPMVR RSAATNLGKF AATVESAYLK
201: SDIMSIFDDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVA HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTD LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LSPELAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGI GFFDDKLGAL CMQWLQDKVY SIRDAAANNL KRLAEEFGPE WAMQHIIPQV LDMTTSPHYL YRMTILRSIS
501: LLAPVMGSEI TCSKLLPVVV TATKDRVPNI KFNVAKVLQS LIPIVDNSVV EKTIRPSLVE LAEDPDVDVR FYANQALQSI DNAMMSG

Best Arabidopsis Sequence Match ( AT3G25800.3 )
(BLAST)

001: MSMIDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEYAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRVPNI KFNVAKVLQS LIPIVDQSVV EKTIRPGLVE LSEDPDVDVR FFANQALQSI DNVMMSS

Arabidopsis Description

PP2AA2Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.