Factsheet for PGSC0003DMT400010375

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g069180.2.1	Tomato	cytosol	97.42	97.42
PGSC0003DMT400033762	Potato	cytosol	89.67	88.76
KRH48464	Soybean	endoplasmic reticulum	89.33	88.42
KRH39213	Soybean	cytosol, endoplasmic reticulum	88.47	87.56
VIT_17s0000g03870.t01	Wine grape	cytosol	91.39	82.71
PGSC0003DMT400041039	Potato	cytosol	45.27	82.7
PGSC0003DMT400041034	Potato	cytosol	34.42	75.19
PGSC0003DMT400044033	Potato	mitochondrion	6.71	54.17

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:102597239	MapMan:13.4.1.2.4	MapMan:18.4.24.1.2.1	InterPro:ARM-like	InterPro:ARM-type_fold
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:HEAT	InterPro:HEAT_type_2	InterPro:IPR011989
InterPro:IPR021133	UniProt:M0ZXX7	PFAM:PF02985	PFAM:PF13646	EnsemblPlantsGene:PGSC0003DMG400004052	PGSC:PGSC0003DMG400004052
EnsemblPlants:PGSC0003DMT400010375	PFscan:PS50077	PANTHER:PTHR10648	PANTHER:PTHR10648:SF20	SUPFAM:SSF48371	UniParc:UPI000294A68E
RefSeq:XP_006354729.1	RefSeq:XP_015167501.1	:	:	:	:

Description

Serine/threonine protein phosphatase 2a regulatory subunit A [Source:PGSC_GENE;Acc:PGSC0003DMG400004052]

Coordinates

chr6:+:50926586..50936687

Molecular Weight (calculated)

64786.1 Da

IEP (calculated)

4.695

GRAVY (calculated)

0.125

Length

581 amino acids

Sequence
(BLAST)

001: MSGIDEPLYP IAVLIDELKN EDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGMFIPYVGG VEHAHVLLPP LEGLCSVEET
101: CVREKAVESL CRIGSQMKES DLVESFIPLV KRLAAGEWFT ARVSSCGLFH IAYPSAPEPL KNELRTIYCQ LCQDDMPMVR RAAATNLGKF AATIEQPHLK
201: TDIMSMFETL TQDDQDSVRL LAVEDCAALG KLLEPKDCVA QILPVIVNFA QDKSWRVRYM VANQLYELCE AVGPEGTRTD LVPAYVQLLR DNEAEVRIAA
301: AGKVTKFCRI LSPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPIL GKDATIEQLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLKDKVY SIRDAAANNV KRLAEEFGPT WAMEHIIPQV LDMINDPHYL YRMTILHAIS
501: LLAPVMGSEI TCSKLLPVII AASKDRVPNI KFNVAKVLQS VIPIVEQSVV ENTIRPCLVE LSEDPDVDVR FFANQALQAT K

Best Arabidopsis Sequence Match ( AT3G25800.3 )
(BLAST)

001: MSMIDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEYAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRVPNI KFNVAKVLQS LIPIVDQSVV EKTIRPGLVE LSEDPDVDVR FFANQALQSI DNVMMSS

Arabidopsis Description

PP2AA2Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.