Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400010375 | Potato | cytosol | 97.42 | 97.42 |
| KRH48464 | Soybean | endoplasmic reticulum | 89.16 | 88.25 |
| Solyc05g009600.2.1 | Tomato | plastid | 88.98 | 88.08 |
| KRH39213 | Soybean | cytosol, endoplasmic reticulum | 88.47 | 87.56 |
| VIT_17s0000g03870.t01 | Wine grape | cytosol | 90.88 | 82.24 |
| Solyc04g007100.2.1 | Tomato | cytosol | 72.29 | 80.0 |
| Solyc05g045950.1.1 | Tomato | cytosol | 17.56 | 57.3 |
| Solyc03g121390.1.1 | Tomato | cytosol | 8.95 | 25.62 |
Protein Annotations
| EnsemblPlants:Solyc06g069180.2.1 | EnsemblPlantsGene:Solyc06g069180.2 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:HEAT_type_2 | InterPro:IPR011989 | InterPro:IPR021133 | InterPro:Vac14_Fab1-bd | PANTHER:PTHR10648 |
| PANTHER:PTHR10648:SF20 | PFAM:PF12755 | PFAM:PF13646 | PFscan:PS50077 | SUPFAM:SSF48371 | UniParc:UPI000276678B |
| UniProt:K4C891 | MapMan:13.4.1.2.4 | MapMan:18.4.24.1.2.1 | : | : | : |
Description
No Description!
Coordinates
chr6:+:42949919..42957337
Molecular Weight (calculated)
64805.1 Da
IEP (calculated)
4.772
GRAVY (calculated)
0.123
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAIDEPLYP IAVLIDELKN EDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGMFIPYVGG VEHARVLLPP LEGLCSVEET
101: CVREKAVESL CKIGSQMKES DLVESFIPLV KRLATGEWFT ARVSSCGLFH IAYPSAPEPL KNELRTIYSQ LCQDDMPMVR RAAATNLGKF AATIEQPHLK
201: TDIMSMFETL TQDDQDSVRL LAVEDCAALG KLLEPKDCVA QILSVIVNFA QDKSWRVRYM VANQLYDLCE AVGPEATRTD LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LSPELAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPIL GKDATIEQLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLKDKVY SIRDAAANNV KRLAEEFGPK WAMEHIIPQV LDMINDPHYL YRMTILHAIS
501: LLAPVLGSEI ACSKLLPVII TASKDRVPNI KFNVAKVLQS VIPIVEQSVV ESTIRPCLVE LSEDPDVDVR FFANQALQAT K
101: CVREKAVESL CKIGSQMKES DLVESFIPLV KRLATGEWFT ARVSSCGLFH IAYPSAPEPL KNELRTIYSQ LCQDDMPMVR RAAATNLGKF AATIEQPHLK
201: TDIMSMFETL TQDDQDSVRL LAVEDCAALG KLLEPKDCVA QILSVIVNFA QDKSWRVRYM VANQLYDLCE AVGPEATRTD LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LSPELAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPIL GKDATIEQLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLKDKVY SIRDAAANNV KRLAEEFGPK WAMEHIIPQV LDMINDPHYL YRMTILHAIS
501: LLAPVLGSEI ACSKLLPVII TASKDRVPNI KFNVAKVLQS VIPIVEQSVV ESTIRPCLVE LSEDPDVDVR FFANQALQAT K
001: MSMIDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEYAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRVPNI KFNVAKVLQS LIPIVDQSVV EKTIRPGLVE LSEDPDVDVR FFANQALQSI DNVMMSS
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRVPNI KFNVAKVLQS LIPIVDQSVV EKTIRPGLVE LSEDPDVDVR FFANQALQSI DNVMMSS
Arabidopsis Description
PP2AA2Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38950]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.