CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69424	Canola	cytosol	87.9	98.49
AT3G25800.3	Thale cress	cytosol	94.96	96.25
CDY39185	Canola	cytosol	73.95	95.03
Solyc05g009600.2.1	Tomato	plastid	90.42	91.65
PGSC0003DMT400033762	Potato	cytosol	90.42	91.65
KRH32720	Soybean	cytosol	16.13	89.72
CDY04182	Canola	cytosol	19.16	87.69
CDY36104	Canola	cytosol	85.04	86.05
CDY51132	Canola	cytosol	84.37	85.67
CDY42101	Canola	cytosol	83.87	84.72
PGSC0003DMT400041039	Potato	cytosol	45.04	84.28
Solyc04g007100.2.1	Tomato	cytosol	74.12	84.0
CDY24397	Canola	cytosol	57.98	83.54
CDY24399	Canola	endoplasmic reticulum	2.52	83.33
CDY04181	Canola	endoplasmic reticulum	47.9	82.13
CDX84994	Canola	mitochondrion	16.13	80.67
CDY24398	Canola	extracellular, vacuole	10.92	80.25
CDY03849	Canola	cytosol	70.59	79.4
VIT_00s2496g00010.t01	Wine grape	cytosol	11.09	77.65
VIT_00s2436g00010.t01	Wine grape	cytosol	10.42	77.5
PGSC0003DMT400041034	Potato	cytosol	34.45	77.07
VIT_01s0011g00330.t01	Wine grape	cytosol	10.92	76.47
GSMUA_AchrUn_...	Banana	cytosol	29.92	73.55
CDX87453	Canola	cytosol	17.82	68.83
CDY70440	Canola	cytosol	16.64	63.87
Solyc05g045950.1.1	Tomato	cytosol	18.99	63.48
CDY35849	Canola	plasma membrane	14.29	62.96
CDY31621	Canola	endoplasmic reticulum, extracellular	16.47	61.64
CDX70737	Canola	cytosol	11.76	58.82
CDX84995	Canola	cytosol	17.31	54.79
CDX84993	Canola	plasma membrane	37.98	53.55
CDY49184	Canola	mitochondrion	9.58	34.55
CDY66919	Canola	cytosol	11.09	17.6
CDY13585	Canola	cytosol, endoplasmic reticulum, golgi	10.25	14.22

Protein Annotations

Gene3D:1.25.10.10	MapMan:13.4.1.2.4	MapMan:18.4.24.1.2.1	UniProt:A0A078FKC6	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY13586	ProteinID:CDY13586	ProteinID:CDY13586.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00077992001	InterPro:HEAT	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133	PFAM:PF02985
PFAM:PF13646	PFscan:PS50077	PANTHER:PTHR10648	PANTHER:PTHR10648:SF20	SUPFAM:SSF48371	UniParc:UPI0004EE4D05

Description

BnaA06g33370DBnaA06g33370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKC6]

Coordinates

chrLK032037:-:98085..102279

Molecular Weight (calculated)

66563.1 Da

IEP (calculated)

4.863

GRAVY (calculated)

0.105

Length

595 amino acids

Sequence
(BLAST)

001: MSMTDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEHAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMKES DLVEHFIPLV KRLAAGEWFT ARVSACGVFH IAYPSAPDAV KTELRSIYTQ LCQDDMPMVR RAAATNLGKF AATIESAHLK
201: TDVMSMFDDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVA HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPELAIQHI LPCVKELSTD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIREAAANNV KRLAEEFGPE WAMQHIVPQV LEMINNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TAAKDRQIIF YYHRVPNIKF NVAKVLQSLI PIVDQSVVEK TIRPGLVELS EDPDVDVRFF ANEALQSIDN VMMSS

Best Arabidopsis Sequence Match ( AT3G25800.3 )
(BLAST)

001: MSMIDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEYAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRVPNI KFNVAKVLQS LIPIVDQSVV EKTIRPGLVE LSEDPDVDVR FFANQALQSI DNVMMSS

Arabidopsis Description

PP2AA2Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.