CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, cytosol

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, golgi
Any Predictor:	endoplasmic reticulum, golgi, plastid
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66919	Canola	cytosol	22.61	25.87
CDX84994	Canola	mitochondrion	4.2	15.13
CDY39185	Canola	cytosol	13.29	12.31
CDY24397	Canola	cytosol	10.72	11.14
CDY36104	Canola	cytosol	14.22	10.37
CDY69424	Canola	cytosol	12.82	10.36
Solyc03g121390.1.1	Tomato	cytosol	4.9	10.34
CDY13586	Canola	cytosol	14.22	10.25
CDY04181	Canola	endoplasmic reticulum	8.16	10.09
CDY51132	Canola	cytosol	13.75	10.07
CDY42101	Canola	cytosol	13.52	9.85
CDY03849	Canola	cytosol	10.72	8.7
CDX70737	Canola	cytosol	2.33	8.4
CDX87453	Canola	cytosol	2.8	7.79
CDY70440	Canola	cytosol	2.8	7.74
CDY31621	Canola	endoplasmic reticulum, extracellular	2.8	7.55
CDY24398	Canola	extracellular, vacuole	1.4	7.41
CDY35849	Canola	plasma membrane	2.33	7.41
CDX84993	Canola	plasma membrane	7.23	7.35
CDY49184	Canola	mitochondrion	2.8	7.27
CDX84995	Canola	cytosol	2.56	5.85
CDY24399	Canola	endoplasmic reticulum	0.23	5.56
CDY04182	Canola	cytosol	1.63	5.38

Protein Annotations

EnsemblPlants:CDY13585	EnsemblPlantsGene:GSBRNA2T00077991001	Gene3D:1.25.40.280	InterPro:BRO1_dom	InterPro:BRO1_sf	InterPro:IPR004328
InterPro:IPR038499	PANTHER:PTHR23030	PANTHER:PTHR23030:SF18	PFAM:PF03097	PFscan:PS51180	ProteinID:CDY13585
ProteinID:CDY13585.1	SEG:seg	SMART:SM01041	UniParc:UPI0004EDCF20	UniProt:A0A078FGN6	MapMan:35.2

Description

BnaA06g33380DBnaA06g33380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGN6]

Coordinates

chrLK032037:-:95504..98015

Molecular Weight (calculated)

48528.5 Da

IEP (calculated)

9.562

GRAVY (calculated)

-0.102

Length

429 amino acids

Sequence
(BLAST)

001: MLTHMFVIKD HIIKIQLIIT ETILLYIKNT SNPKLHPYLF VCSSSCCPRL QVTLSSVCNE TKTMLRYFIP IPKTKTIVLG NVIKFTEKET KTELNISLSR
101: KQVEDSISRS SHGVEAIVRE DLVRIKAYLL FLRYMIDHMN KPCNQEISNR FTKNLMIRWS SGLNLDCKSS NGLSLASIFQ PKSTPFFQSK DMLFELHMIL
201: FIYALKLREK AMVLASKADM VESTKAYREA AGVFDSVCKI GHTDWSYIEK FPELTSPVCS SLKLLCLAEG QAVTANKAKE KGTSASLVAK LHYGVTQFVA
301: EANASLLSKT NTQVKQLSSR FLDYVSTLGA LHELKSGKHL AESLESEGEL GEAIGVLRRS LARAKLTTQC RSDTWKSIFK KEREQVITMM NKYENLNESM
401: MLQRIPLEAD LPTLQGDKIV KLIPYIDTK

Best Arabidopsis Sequence Match ( AT1G13310.1 )
(BLAST)

001: MTMMQYLIPE PKTKEILYEK TLQAAGPITL GEVKELTSKR KIIEESVNKT SKVIDSTTRE MTRGLTSACE QDLHKLGEYL PLLFNLVHYT DKIKRVSNLK
101: IRWSSGLISQ TLIQRTCPKF FQVDNIMFEF GMVLFIYAVK LRERAMELVS TDSKKAVAVY REASGVFHHL SHEILPLLQT CLPPGKLPEL TPPLCSALSL
201: LCLAEGQAVT TEKAEESGKS ASLLSKLHFG IFQFLSEAYA LLSSRLTGEY KDLSTRFLEY VTTMGALHEL KSQKYLAELL ESEDRVGDAV GVLRRALAAA
301: KKSTPSKDDK WIAIFKKERE DVAKNMAKYE KLNDSMMLQK IPIDREIPFP KGEKIVNLIP YTPTRVVREL RFKS

Arabidopsis Description

Endosomal targeting BRO1-like domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FX66]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.