CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87453	Canola	cytosol	40.61	43.51
CDY35849	Canola	plasma membrane	34.55	42.22
CDY31621	Canola	endoplasmic reticulum, extracellular	38.79	40.25
CDY70440	Canola	cytosol	34.55	36.77
CDX70737	Canola	cytosol	21.21	29.41
CDX84995	Canola	cytosol	32.73	28.72
Solyc05g045950.1.1	Tomato	cytosol	26.67	24.72
CDY24397	Canola	cytosol	36.97	14.77
PGSC0003DMT400041039	Potato	cytosol	27.27	14.15
CDY04181	Canola	endoplasmic reticulum	29.7	14.12
CDY39185	Canola	cytosol	32.73	11.66
CDY03849	Canola	cytosol	36.36	11.34
CDY42101	Canola	cytosol	40.0	11.21
CDY36104	Canola	cytosol	39.39	11.05
CDY51132	Canola	cytosol	37.58	10.58
Solyc04g007100.2.1	Tomato	cytosol	32.12	10.1
Solyc05g009600.2.1	Tomato	plastid	35.76	10.05
AT3G25800.3	Thale cress	cytosol	35.76	10.05
PGSC0003DMT400033762	Potato	cytosol	35.76	10.05
CDY69424	Canola	cytosol	30.91	9.6
CDY13586	Canola	cytosol	34.55	9.58
VIT_00s2436g00010.t01	Wine grape	cytosol	2.42	5.0
VIT_01s0011g00330.t01	Wine grape	cytosol	2.42	4.71
VIT_00s2496g00010.t01	Wine grape	cytosol	2.42	4.71
KRH32720	Soybean	cytosol	2.42	3.74
CDY66919	Canola	cytosol	8.48	3.73
CDY24398	Canola	extracellular, vacuole	1.82	3.7
PGSC0003DMT400041034	Potato	cytosol	4.85	3.01
GSMUA_AchrUn_...	Banana	cytosol	4.24	2.89
CDY13585	Canola	cytosol, endoplasmic reticulum, golgi	7.27	2.8
CDX84994	Canola	mitochondrion	1.82	2.52
CDX84993	Canola	plasma membrane	6.06	2.37
CDY04182	Canola	cytosol	1.21	1.54
CDY24399	Canola	endoplasmic reticulum	0.0	0.0

Protein Annotations

EnsemblPlants:CDY49184	EnsemblPlantsGene:GSBRNA2T00092537001	Gene3D:1.25.10.10	InterPro:ARM-like	InterPro:IPR011989	PANTHER:PTHR10648
PANTHER:PTHR10648:SF20	ProteinID:CDY49184	ProteinID:CDY49184.1	UniParc:UPI0004EE11F4	UniProt:A0A078III5	MapMan:35.1

Description

BnaCnng16920DBnaCnng16920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078III5]

Coordinates

chrLK032816:+:30469..33416

Molecular Weight (calculated)

18584.8 Da

IEP (calculated)

11.025

GRAVY (calculated)

-0.224

Length

165 amino acids

Sequence
(BLAST)

001: MLKHRGGLST MYLCKYFTIN LMNKFQGILS FNCSTVWKVL FGKVYSIHEA AENNLKRFAE EFGPEWAMQH LVLDMVTNPH YLHRMMVLRA ISLMATSSKR
101: QVQCGKTSAI AHPHSRPVSG GENNMSVFGG PRDGNWVVPT RLVPPRRGTQ SMRVLAVQAR AGRGH

Best Arabidopsis Sequence Match ( AT1G25490.1 )
(BLAST)

001: MAMVDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENSDDD DEVLLAMAEE LGVFIPFVGG IEFAHVLLPP LESLCTVEET
101: CVREKAVESL CKIGSQMKEN DLVESFVPLV KRLAGGEWFA ARVSACGIFH VAYQGCTDVL KTELRATYSQ LCKDDMPMVR RAAASNLGKF ATTVESTFLI
201: AEIMTMFDDL TKDDQDSVRL LAVEGCAALG KLLEPQDCVA RILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPDCTRTD LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRL LNPELAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPIL GKDSTIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY VPLLASQLGI GFFDDKLGAL CMQWLQDKVY SIREAAANNL KRLAEEFGPE WAMQHLVPQV LDMVNNPHYL HRMMVLRAIS
501: LMAPVMGSEI TCSKFLPVVV EASKDRVPNI KFNVAKLLQS LIPIVDQSVV DKTIRQCLVD LSEDPDVDVR YFANQALNSI DGSTAAQS

Arabidopsis Description

PP2AA1Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38845]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.