CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13585	Canola	cytosol, endoplasmic reticulum, golgi	25.87	22.61
CDY69424	Canola	cytosol	17.6	12.43
CDY04182	Canola	cytosol	4.0	11.54
CDY13586	Canola	cytosol	17.6	11.09
CDY51132	Canola	cytosol	17.33	11.09
CDY39185	Canola	cytosol	13.6	11.02
CDY36104	Canola	cytosol	16.8	10.71
CDY04181	Canola	endoplasmic reticulum	9.87	10.66
CDY42101	Canola	cytosol	16.27	10.36
CDY24397	Canola	cytosol	11.2	10.17
CDY03849	Canola	cytosol	14.13	10.02
CDX84993	Canola	plasma membrane	10.4	9.24
CDY24398	Canola	extracellular, vacuole	1.87	8.64
CDY49184	Canola	mitochondrion	3.73	8.48
CDY31621	Canola	endoplasmic reticulum, extracellular	3.47	8.18
CDY70440	Canola	cytosol	3.2	7.74
CDX87453	Canola	cytosol	2.93	7.14
CDX84995	Canola	cytosol	3.47	6.91
CDX84994	Canola	mitochondrion	2.13	6.72
CDX70737	Canola	cytosol	1.87	5.88
CDY24399	Canola	endoplasmic reticulum	0.27	5.56
CDY35849	Canola	plasma membrane	1.87	5.19
Solyc03g121390.1.1	Tomato	cytosol	1.87	3.45

Protein Annotations

EnsemblPlants:CDY66919	EnsemblPlantsGene:GSBRNA2T00057629001	Gene3D:1.25.10.10	Gene3D:1.25.40.280	InterPro:ARM-like	InterPro:BRO1_sf
InterPro:IPR011989	InterPro:IPR038499	PANTHER:PTHR23030	PANTHER:PTHR23030:SF18	ProteinID:CDY66919	ProteinID:CDY66919.1
SEG:seg	UniParc:UPI0004EECA38	UniProt:A0A078JJK9	MapMan:35.1	:	:

Description

BnaCnng52830DBnaCnng52830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJK9]

Coordinates

chrLK035579:-:2593..5373

Molecular Weight (calculated)

42650.9 Da

IEP (calculated)

9.561

GRAVY (calculated)

-0.108

Length

375 amino acids

Sequence
(BLAST)

001: MDFSRDLVPN IKFNVAKVLQ SLIPIVDQSV VEKTIRPGLV ELSEDPDVDV SIAFFGFEQI VLGNVFKFME KETKTELNIS LSRKQVEDSI SRSSHGVEAI
101: VREDLVRIKA YLLFLRYMID HMNKPCNLEI SNRFTKNLKI RWSSGLNLDC KSSNGLSLAS IFQLKSTPFF QSKDMLFELH MILFIYALKL TEKAMVLVSK
201: VYVDLKQIWW NPERHIEKQL VFLTMYVRLV ITDWSYIKKF PELTSPVCSS LKLICLAEGQ AVTANKAKEK GTSASLVAKL HYGVTQFVAE ANASLLSKTN
301: TQVKQLSTQF LDYVSTLGAL HELKSGKHLA ENLESEGELG EEAIGVLRRS LARAKLTTQC RSDTWNRSSR RRESR

Best Arabidopsis Sequence Match ( AT1G13310.1 )
(BLAST)

001: MTMMQYLIPE PKTKEILYEK TLQAAGPITL GEVKELTSKR KIIEESVNKT SKVIDSTTRE MTRGLTSACE QDLHKLGEYL PLLFNLVHYT DKIKRVSNLK
101: IRWSSGLISQ TLIQRTCPKF FQVDNIMFEF GMVLFIYAVK LRERAMELVS TDSKKAVAVY REASGVFHHL SHEILPLLQT CLPPGKLPEL TPPLCSALSL
201: LCLAEGQAVT TEKAEESGKS ASLLSKLHFG IFQFLSEAYA LLSSRLTGEY KDLSTRFLEY VTTMGALHEL KSQKYLAELL ESEDRVGDAV GVLRRALAAA
301: KKSTPSKDDK WIAIFKKERE DVAKNMAKYE KLNDSMMLQK IPIDREIPFP KGEKIVNLIP YTPTRVVREL RFKS

Arabidopsis Description

Endosomal targeting BRO1-like domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FX66]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.