Factsheet for VIT_00s0131g00270.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0027g00070.t01	Wine grape	cytosol	97.4	97.4
VIT_00s0131g00290.t01	Wine grape	cytosol	97.4	97.4
VIT_04s0043g00200.t01	Wine grape	mitochondrion	93.51	93.51
VIT_04s0008g07090.t01	Wine grape	cytosol	72.73	62.22
VIT_03s0038g00200.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	72.73	39.16
VIT_15s0045g00050.t01	Wine grape	cytosol	88.31	37.78
CDX84993	Canola	plasma membrane	64.94	11.85
GSMUA_Achr3P06410_001	Banana	cytosol	77.92	11.56
TraesCS5D01G172700.4	Wheat	cytosol	75.32	9.88
TraesCS5B01G165200.3	Wheat	cytosol, golgi	75.32	9.88
Zm00001d045482_P001	Maize	cytosol	75.32	9.88
Zm00001d036031_P001	Maize	cytosol	75.32	9.88
TraesCS5A01G168400.5	Wheat	cytosol	75.32	9.88
KXG19189	Sorghum	cytosol	75.32	9.88
HORVU5Hr1G051850.3	Barley	cytosol	75.32	9.88
VIT_17s0000g03870.t01	Wine grape	cytosol	81.82	9.81
KXG20320	Sorghum	cytosol	74.03	9.71
Zm00001d046506_P002	Maize	cytosol	72.73	9.41
VIT_01s0011g03280.t01	Wine grape	cytosol	66.23	8.69
VIT_01s0011g00330.t01	Wine grape	cytosol	1.3	1.18
VIT_00s2496g00010.t01	Wine grape	cytosol	1.3	1.18
VIT_00s2436g00010.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_00s0131g00270	EMBL:FN595508	EnsemblPlants:VIT_00s0131g00270.t01	EnsemblPlantsGene:VIT_00s0131g00270	Gene3D:1.25.10.10	GO:GO:0003674
GO:GO:0005488	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133
PANTHER:PTHR10648	PANTHER:PTHR10648:SF20	PFscan:PS50077	ProteinID:CCB49443	ProteinID:CCB49443.1	SUPFAM:SSF48371
UniParc:UPI0002109DEB	UniProt:F6HB49	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrUn:-:2752845..2753316

Molecular Weight (calculated)

8277.0 Da

IEP (calculated)

5.622

GRAVY (calculated)

0.032

Length

77 amino acids

Sequence
(BLAST)

1: MPMVKRSAAS NLGKFAATVE TAHSKADIMS IFEDLTKDDQ DSVRLLAVKG CAALGKLLEP QDCVAHIPPI NYEFLSG

Best Arabidopsis Sequence Match ( AT1G13320.4 )
(BLAST)

001: MPMVRRAAAT NLGKFAATIE SAHLKTDIMS MFEDLTQDDQ DSVRLLAVEG CAALGKLLEP QDCVAHILPV IVNFSQDKSW RVRYMVANQL YELCEAVGPE
101: PTRTDLVPAY ARLLCDNEAE VRIAAAGKVT KFCRILNPEL AIQHILPCVK ELSSDSSQHV RSALASVIMG MAPVLGKDAT IEHLLPIFLS LLKDEFPDVR
201: LNIISKLDQV NQVIGIDLLS QSLLPAIVEL AEDRHWRVRL AIIEYIPLLA SQLGVGFFDE KLGALCMQWL QDKVHSIREA AANNLKRLAE EFGPEWAMQH
301: IVPQVLEMIN NPHYLYRMTI LRAVSLLAPV MGSEITCSKL LPAVITASKD RVPNIKFNVA KMMQSLIPIV DQAVVENMIR PCLVELSEDP DVDVRYFANQ
401: ALQSIDNVMM SS

Arabidopsis Description

PP2AA3Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38951]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.