Factsheet for VIT_00s0131g00290.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0027g00070.t01	Wine grape	cytosol	100.0	100.0
VIT_00s0131g00270.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	97.4	97.4
VIT_04s0043g00200.t01	Wine grape	mitochondrion	96.1	96.1
VIT_04s0008g07090.t01	Wine grape	cytosol	75.32	64.44
VIT_03s0038g00200.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	75.32	40.56
VIT_15s0045g00050.t01	Wine grape	cytosol	90.91	38.89
GSMUA_Achr3P06410_001	Banana	cytosol	79.22	11.75
CDX84993	Canola	plasma membrane	63.64	11.61
VIT_17s0000g03870.t01	Wine grape	cytosol	84.42	10.12
TraesCS5D01G172700.4	Wheat	cytosol	76.62	10.05
Zm00001d045482_P001	Maize	cytosol	76.62	10.05
Zm00001d036031_P001	Maize	cytosol	76.62	10.05
TraesCS5B01G165200.3	Wheat	cytosol, golgi	76.62	10.05
TraesCS5A01G168400.5	Wheat	cytosol	76.62	10.05
KXG19189	Sorghum	cytosol	76.62	10.05
HORVU5Hr1G051850.3	Barley	cytosol	76.62	10.05
KXG20320	Sorghum	cytosol	75.32	9.88
Zm00001d046506_P002	Maize	cytosol	74.03	9.58
VIT_01s0011g03280.t01	Wine grape	cytosol	67.53	8.86
VIT_01s0011g00330.t01	Wine grape	cytosol	1.3	1.18
VIT_00s2496g00010.t01	Wine grape	cytosol	1.3	1.18
VIT_00s2436g00010.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	ProteinID:CCB47254	ProteinID:CCB47254.1
ProteinID:CCB49445	ProteinID:CCB49445.1	UniProt:F6H4W5	EMBL:FN595234	EMBL:FN595508	GO:GO:0003674
GO:GO:0005488	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133	PFscan:PS50077	PANTHER:PTHR10648
PANTHER:PTHR10648:SF20	SUPFAM:SSF48371	UniParc:UPI0002108140	ArrayExpress:VIT_00s0131g00290	EnsemblPlantsGene:VIT_00s0131g00290	EnsemblPlants:VIT_00s0131g00290.t01

Description

No Description!

Coordinates

chrUn:+:2755185..2755656

Molecular Weight (calculated)

8247.0 Da

IEP (calculated)

4.938

GRAVY (calculated)

0.070

Length

77 amino acids

Sequence
(BLAST)

1: MPMVKRSAAS NLGKFAATVE AAHSKADIMS IFEDLTQDDQ DSVRLLAVKG CAALGKLLEP QDCVAHIPPI NYEFLSG

Best Arabidopsis Sequence Match ( AT1G13320.4 )
(BLAST)

001: MPMVRRAAAT NLGKFAATIE SAHLKTDIMS MFEDLTQDDQ DSVRLLAVEG CAALGKLLEP QDCVAHILPV IVNFSQDKSW RVRYMVANQL YELCEAVGPE
101: PTRTDLVPAY ARLLCDNEAE VRIAAAGKVT KFCRILNPEL AIQHILPCVK ELSSDSSQHV RSALASVIMG MAPVLGKDAT IEHLLPIFLS LLKDEFPDVR
201: LNIISKLDQV NQVIGIDLLS QSLLPAIVEL AEDRHWRVRL AIIEYIPLLA SQLGVGFFDE KLGALCMQWL QDKVHSIREA AANNLKRLAE EFGPEWAMQH
301: IVPQVLEMIN NPHYLYRMTI LRAVSLLAPV MGSEITCSKL LPAVITASKD RVPNIKFNVA KMMQSLIPIV DQAVVENMIR PCLVELSEDP DVDVRYFANQ
401: ALQSIDNVMM SS

Arabidopsis Description

PP2AA3Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38951]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.