Factsheet for VIT_04s0043g00200.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0027g00070.t01	Wine grape	cytosol	96.1	96.1
VIT_00s0131g00290.t01	Wine grape	cytosol	96.1	96.1
VIT_00s0131g00270.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	93.51	93.51
VIT_04s0008g07090.t01	Wine grape	cytosol	71.43	61.11
VIT_03s0038g00200.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	72.73	39.16
VIT_15s0045g00050.t01	Wine grape	cytosol	87.01	37.22
GSMUA_Achr3P06410_001	Banana	cytosol	75.32	11.18
CDX84993	Canola	plasma membrane	59.74	10.9
VIT_17s0000g03870.t01	Wine grape	cytosol	80.52	9.66
TraesCS5D01G172700.4	Wheat	cytosol	72.73	9.54
TraesCS5B01G165200.3	Wheat	cytosol, golgi	72.73	9.54
TraesCS5A01G168400.5	Wheat	cytosol	72.73	9.54
Zm00001d045482_P001	Maize	cytosol	72.73	9.54
Zm00001d036031_P001	Maize	cytosol	72.73	9.54
KXG19189	Sorghum	cytosol	72.73	9.54
HORVU5Hr1G051850.3	Barley	cytosol	72.73	9.54
KXG20320	Sorghum	cytosol	71.43	9.37
Zm00001d046506_P002	Maize	cytosol	70.13	9.08
VIT_01s0011g03280.t01	Wine grape	cytosol	63.64	8.35
VIT_01s0011g00330.t01	Wine grape	cytosol	1.3	1.18
VIT_00s2496g00010.t01	Wine grape	cytosol	1.3	1.18
VIT_00s2436g00010.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

ArrayExpress:VIT_04s0043g00200	EMBL:FN595763	EnsemblPlants:VIT_04s0043g00200.t01	EnsemblPlantsGene:VIT_04s0043g00200	Gene3D:1.25.10.10	GO:GO:0003674
GO:GO:0005488	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133
PANTHER:PTHR10648	PANTHER:PTHR10648:SF20	PFscan:PS50077	ProteinID:CCB51847	ProteinID:CCB51847.1	SUPFAM:SSF48371
UniParc:UPI0002108DB9	UniProt:F6HI00	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4:+:13122597..13123068

Molecular Weight (calculated)

8388.1 Da

IEP (calculated)

4.990

GRAVY (calculated)

0.009

Length

77 amino acids

Sequence
(BLAST)

1: MPMVKRSAAS NLGKFAATVE AAHSKADIMS IFEDLTQDDQ DSVRLLAVKG RAALEKLLEP QDCVAHIPLI NYEFLSG

Best Arabidopsis Sequence Match ( AT1G13320.4 )
(BLAST)

001: MPMVRRAAAT NLGKFAATIE SAHLKTDIMS MFEDLTQDDQ DSVRLLAVEG CAALGKLLEP QDCVAHILPV IVNFSQDKSW RVRYMVANQL YELCEAVGPE
101: PTRTDLVPAY ARLLCDNEAE VRIAAAGKVT KFCRILNPEL AIQHILPCVK ELSSDSSQHV RSALASVIMG MAPVLGKDAT IEHLLPIFLS LLKDEFPDVR
201: LNIISKLDQV NQVIGIDLLS QSLLPAIVEL AEDRHWRVRL AIIEYIPLLA SQLGVGFFDE KLGALCMQWL QDKVHSIREA AANNLKRLAE EFGPEWAMQH
301: IVPQVLEMIN NPHYLYRMTI LRAVSLLAPV MGSEITCSKL LPAVITASKD RVPNIKFNVA KMMQSLIPIV DQAVVENMIR PCLVELSEDP DVDVRYFANQ
401: ALQSIDNVMM SS

Arabidopsis Description

PP2AA3Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38951]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.