Factsheet for GSMUA_AchrUn_randomP25680_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84993	Canola	plasma membrane	55.94	34.6
KXG19189	Sorghum	cytosol	75.1	33.39
Zm00001d036031_P001	Maize	cytosol	74.71	33.22
Zm00001d045482_P001	Maize	cytosol	74.71	33.22
KXG20320	Sorghum	cytosol	74.33	33.05
GSMUA_Achr4P13030_001	Banana	cytosol	73.56	32.71
HORVU5Hr1G051850.3	Barley	cytosol	73.56	32.71
GSMUA_Achr8P25340_001	Banana	cytosol	73.18	32.54
TraesCS5A01G168400.5	Wheat	cytosol	73.18	32.54
TraesCS5B01G165200.3	Wheat	cytosol, golgi	73.18	32.54
TraesCS5D01G172700.4	Wheat	cytosol	73.18	32.54
Zm00001d046506_P002	Maize	cytosol	72.41	31.76
GSMUA_Achr4P09250_001	Banana	cytosol	71.26	31.69
GSMUA_Achr3P06410_001	Banana	cytosol	52.49	26.4
GSMUA_AchrUn_...	Banana	cytosol	1.15	1.24
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum	0.77	0.9

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP25680_001	EnsemblPlants:GSMUA_AchrUn_randomT25680_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG25680_001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:HEAT_type_2	InterPro:IPR011989	InterPro:IPR021133	PANTHER:PTHR10648
PANTHER:PTHR10648:SF20	PFscan:PS50077	SUPFAM:SSF48371	UniParc:UPI000296B78A	UniProt:M0UCC6	MapMan:13.4.1.2.4
MapMan:18.4.24.1.2.1	:	:	:	:	:

Description

Putative Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG25680_001]

Coordinates

chrchrUn_random:-:126641156..126644739

Molecular Weight (calculated)

29388.8 Da

IEP (calculated)

4.739

GRAVY (calculated)

-0.030

Length

261 amino acids

Sequence
(BLAST)

001: MAMIDEPLYP IAILIDELKN EDIQLRLNSI RRLSTIARAL GEERTRKELI PFLCENNDDD DEVLLAMAEE LGVFIPYVGG IQHAHVLLPP LETLCTVEET
101: CVRDKAVESL CRIGAQMKES DLVEWFIPLV KRLAAGEWFT ARVSSCGLFH IAYPSATELL KAELRSMYGH LCQDDMPMVR RSAASNLGKF AATVEPNTLK
201: TDVMSIFDDL TLDENWTRVL LISLTMVYAE AKPYMSQLKK FTINGPNQSR QYRMLLSGTG G

Best Arabidopsis Sequence Match ( AT3G25800.3 )
(BLAST)

001: MSMIDEPLYP IAVLIDELKN DDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDD DEVLLAMAEE LGVFIPYVGG VEYAHVLLPP LETLSTVEET
101: CVREKAVESL CRVGSQMRES DLVDHFISLV KRLAAGEWFT ARVSACGVFH IAYPSAPDML KTELRSLYTQ LCQDDMPMVR RAAATNLGKF AATVESAHLK
201: TDVMSMFEDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVQ HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEPTRTE LVPAYVRLLR DNEAEVRIAA
301: AGKVTKFCRI LNPEIAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKDATIEHLL PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP
401: AIVELAEDRH WRVRLAIIEY IPLLASQLGV GFFDDKLGAL CMQWLQDKVH SIRDAAANNL KRLAEEFGPE WAMQHIVPQV LEMVNNPHYL YRMTILRAVS
501: LLAPVMGSEI TCSKLLPVVM TASKDRVPNI KFNVAKVLQS LIPIVDQSVV EKTIRPGLVE LSEDPDVDVR FFANQALQSI DNVMMSS

Arabidopsis Description

PP2AA2Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Source:UniProtKB/Swiss-Prot;Acc:Q38950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.