Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P16810_001 | Banana | cytosol | 44.13 | 23.8 |
| KRH19405 | Soybean | cytosol | 44.69 | 23.26 |
| KRH02540 | Soybean | cytosol | 44.13 | 23.03 |
| GSMUA_Achr8P26880_001 | Banana | nucleus | 26.82 | 12.44 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 4.47 | 7.14 |
| GSMUA_Achr8P21040_001 | Banana | nucleus | 14.53 | 6.91 |
| GSMUA_Achr5P14000_001 | Banana | cytosol | 11.17 | 6.8 |
| GSMUA_Achr9P13630_001 | Banana | cytosol | 8.94 | 5.67 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P18710_001 | EnsemblPlants:GSMUA_Achr10T18710_001 | EnsemblPlantsGene:GSMUA_Achr10G18710_001 | Gene3D:1.10.150.20 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | InterPro:DNA_repair_Rad51/TF_NusA_a-hlx | PANTHER:PTHR22942 | PANTHER:PTHR22942:SF45 | SEG:seg | SUPFAM:SSF47794 |
| UniParc:UPI00029514DD | UniProt:M0RJE6 | MapMan:35.1 | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G18710_001]
Coordinates
chr10:-:25312690..25315241
Molecular Weight (calculated)
20140.7 Da
IEP (calculated)
6.358
GRAVY (calculated)
0.078
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAAQTHQR MPKEQEEAED VQHGPFPIEH LQASGIAAID VKMLKDAELC TVESVAYSPR KDLLQIKRIS EAEVDKIIEA ASKLVPLGFT SASQLHAQRL
101: EIIQITSGSR ELDKEEFKLD LLLNYIVNSA LVKLSCVTLF VSLVSFPWIK VVVKERHYIL MLRVPLGPKD FFRLLTGLD
101: EIIQITSGSR ELDKEEFKLD LLLNYIVNSA LVKLSCVTLF VSLVSFPWIK VVVKERHYIL MLRVPLGPKD FFRLLTGLD
001: MTTMEQRRNQ NAVQQQDDEE TQHGPFPVEQ LQAAGIASVD VKKLRDAGLC TVEGVAYTPR KDLLQIKGIS DAKVDKIVEA ASKLVPLGFT SASQLHAQRQ
101: EIIQITSGSR ELDKVLEGGI ETGSITELYG EFRSGKTQLC HTLCVTCQLP MDQGGGEGKA MYIDAEGTFR PQRLLQIADR FGLNGADVLE NVAYARAYNT
201: DHQSRLLLEA ASMMIETRFA LLIVDSATAL YRTDFSGRGE LSARQMHLAK FLRSLQKLAD EFGVAVVITN QVVAQVDGSA LFAGPQFKPI GGNIMAHATT
301: TRSVMFANST NPCFLVFFVR VR
101: EIIQITSGSR ELDKVLEGGI ETGSITELYG EFRSGKTQLC HTLCVTCQLP MDQGGGEGKA MYIDAEGTFR PQRLLQIADR FGLNGADVLE NVAYARAYNT
201: DHQSRLLLEA ASMMIETRFA LLIVDSATAL YRTDFSGRGE LSARQMHLAK FLRSLQKLAD EFGVAVVITN QVVAQVDGSA LFAGPQFKPI GGNIMAHATT
301: TRSVMFANST NPCFLVFFVR VR
Arabidopsis Description
RAD51DNA repair protein RAD51 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P94102]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.