Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 28.0 | 39.55 |
| GSMUA_Achr10P... | Banana | nucleus | 28.0 | 36.27 |
| VIT_14s0006g02850.t01 | Wine grape | nucleus | 31.6 | 31.73 |
| GSMUA_Achr9P00560_001 | Banana | nucleus | 32.0 | 31.62 |
| GSMUA_Achr1P21010_001 | Banana | nucleus | 32.0 | 29.96 |
| GSMUA_Achr6P09740_001 | Banana | nucleus | 26.4 | 28.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.2 | 26.94 |
| GSMUA_Achr5P23700_001 | Banana | nucleus | 23.2 | 22.75 |
| Zm00001d019127_P001 | Maize | plastid | 16.4 | 13.4 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P25460_001 | EnsemblPlants:GSMUA_Achr10T25460_001 | EnsemblPlantsGene:GSMUA_Achr10G25460_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI00029616C5 | UniProt:M0RLC0 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G25460_001]
Coordinates
chr10:-:29470147..29471207
Molecular Weight (calculated)
27834.5 Da
IEP (calculated)
7.739
GRAVY (calculated)
-0.391
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEFLEDSGL ELTRKFPELE GPAMENSSLE LMCYPQQNCL SHQPEFSMPS VDNLLSSMVT PVSHAMVSAG QQSHGDQKMK VTAEPVFGLS LDCSNSGEKS
101: SVLNILLQSC GIKKRGRSLQ RASEPKEVVH VRARRGEATD SHSLAERVRR EKINRKMRFL RDLVPGCCKA MGMAGMLDEI INYVRSLQNQ VELLSMEIAA
201: AASSYDNSWV ETPQVMKLIR GFRSHRGSRE KGLRTEYVEC FACSATKLAG
101: SVLNILLQSC GIKKRGRSLQ RASEPKEVVH VRARRGEATD SHSLAERVRR EKINRKMRFL RDLVPGCCKA MGMAGMLDEI INYVRSLQNQ VELLSMEIAA
201: AASSYDNSWV ETPQVMKLIR GFRSHRGSRE KGLRTEYVEC FACSATKLAG
001: MANFENLSSD FQTIAMDIYS SITQAADLNN NNSNLHFQTF HPSSTSLESL FLHHHQQQLL HFPGNSPDSS NNFSSTSSFL HSDHNIVDET KKRKALLPTL
101: SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS
201: LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQVLEHSNNV FQFLR
101: SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS
201: LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQVLEHSNNV FQFLR
Arabidopsis Description
BEE1Transcription factor BEE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ13]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.