Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- vacuole 1
- plastid 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82053 | Canola | cytosol | 25.39 | 41.88 |
| GSMUA_Achr6P09740_001 | Banana | nucleus | 48.19 | 40.43 |
| CDY45873 | Canola | nucleus | 40.93 | 39.7 |
| GSMUA_Achr11P... | Banana | nucleus | 35.23 | 38.42 |
| Bra025910.1-P | Field mustard | nucleus | 45.6 | 35.48 |
| AT1G25330.1 | Thale cress | nucleus | 40.93 | 35.43 |
| Bra010993.1-P | Field mustard | nucleus | 40.93 | 35.27 |
| GSMUA_Achr1P21010_001 | Banana | nucleus | 47.67 | 34.46 |
| CDY36107 | Canola | nucleus | 39.9 | 34.38 |
| AT1G18400.1 | Thale cress | nucleus | 46.11 | 34.23 |
| KRH60345 | Soybean | nucleus | 43.52 | 34.15 |
| CDY24404 | Canola | nucleus | 39.38 | 33.93 |
| KRH41647 | Soybean | nucleus | 44.04 | 33.73 |
| VIT_17s0000g03580.t01 | Wine grape | nucleus | 46.11 | 33.58 |
| CDY26165 | Canola | nucleus | 45.6 | 33.46 |
| VIT_01s0011g03720.t01 | Wine grape | nucleus | 44.56 | 33.33 |
| CDY65027 | Canola | nucleus | 45.08 | 33.08 |
| KRH39174 | Soybean | nucleus | 46.11 | 32.6 |
| Solyc03g119390.2.1 | Tomato | nucleus | 45.6 | 32.59 |
| GSMUA_Achr9P00560_001 | Banana | nucleus | 42.49 | 32.41 |
| KRH48495 | Soybean | nucleus | 45.6 | 32.35 |
| AT1G73830.1 | Thale cress | nucleus | 43.52 | 32.18 |
| PGSC0003DMT400013766 | Potato | nucleus | 45.08 | 31.99 |
| PGSC0003DMT400014656 | Potato | nucleus | 45.6 | 31.88 |
| Solyc12g036470.1.1 | Tomato | nucleus | 44.56 | 31.62 |
| CDY67050 | Canola | nucleus | 42.49 | 31.3 |
| CDX73020 | Canola | nucleus | 42.49 | 31.3 |
| Bra015960.1-P | Field mustard | nucleus | 42.49 | 31.3 |
| Bra008113.1-P | Field mustard | nucleus | 40.93 | 30.15 |
| CDY47737 | Canola | nucleus | 40.93 | 30.15 |
| KRH15645 | Soybean | nucleus | 38.34 | 29.02 |
| KRH05373 | Soybean | nucleus | 37.82 | 28.19 |
| GSMUA_Achr10P... | Banana | nucleus | 36.27 | 28.0 |
| Solyc04g007300.2.1 | Tomato | nucleus, plastid | 42.49 | 27.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.31 | 26.57 |
| GSMUA_Achr5P23700_001 | Banana | nucleus | 33.68 | 25.49 |
| Zm00001d019127_P001 | Maize | plastid | 24.35 | 15.36 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P19850_001 | EnsemblPlants:GSMUA_Achr10T19850_001 | EnsemblPlantsGene:GSMUA_Achr10G19850_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF296 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002960935 | UniProt:M0RJR0 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G19850_001]
Coordinates
chr10:+:26069155..26070862
Molecular Weight (calculated)
21510.9 Da
IEP (calculated)
7.826
GRAVY (calculated)
-0.269
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPVSNSEH ASAALSESGL RVLEIKKNSS NRSGGGKRAR GNSRKAEKLK EVVHVRARRG QATDSHSLAE RVRRERINER MRCLQGLVPG CYKAMGMAGM
101: LDEIINYVQS LQNQVEFLSL KLSAASSFYD CCFDMGMETL STLQAGDGQE TDEAAVRPLY FFLCLPCLHL STLTQYLMLL SISTEWQEIS HVF
101: LDEIINYVQS LQNQVEFLSL KLSAASSFYD CCFDMGMETL STLQAGDGQE TDEAAVRPLY FFLCLPCLHL STLTQYLMLL SISTEWQEIS HVF
001: MANFENLSSD FQTIAMDIYS SITQAADLNN NNSNLHFQTF HPSSTSLESL FLHHHQQQLL HFPGNSPDSS NNFSSTSSFL HSDHNIVDET KKRKALLPTL
101: SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS
201: LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQRAKARETV EMGRQTRDGS PVFHLSTWSL
101: SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS
201: LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQRAKARETV EMGRQTRDGS PVFHLSTWSL
Arabidopsis Description
BEE1Transcription factor BEE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ13]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.