Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400014656 | Potato | nucleus | 70.0 | 68.48 |
| CDX82053 | Canola | cytosol | 22.59 | 52.14 |
| Solyc12g036470.1.1 | Tomato | nucleus | 52.22 | 51.84 |
| CDY45873 | Canola | nucleus | 36.3 | 49.25 |
| KRH60345 | Soybean | nucleus | 42.59 | 46.75 |
| KRH41647 | Soybean | nucleus | 43.33 | 46.43 |
| VIT_17s0000g03580.t01 | Wine grape | nucleus | 45.56 | 46.42 |
| Bra025910.1-P | Field mustard | nucleus | 42.59 | 46.37 |
| GSMUA_Achr10P... | Banana | nucleus | 32.59 | 45.6 |
| KRH39174 | Soybean | nucleus | 45.93 | 45.42 |
| KRH48495 | Soybean | nucleus | 45.56 | 45.22 |
| CDY26165 | Canola | nucleus | 43.33 | 44.49 |
| CDY65027 | Canola | nucleus | 42.96 | 44.11 |
| CDY67050 | Canola | nucleus | 41.85 | 43.13 |
| Bra015960.1-P | Field mustard | nucleus | 41.85 | 43.13 |
| GSMUA_Achr11P... | Banana | nucleus | 28.15 | 42.94 |
| AT1G73830.1 | Thale cress | nucleus | 41.48 | 42.91 |
| CDX73020 | Canola | nucleus | 41.48 | 42.75 |
| AT1G18400.1 | Thale cress | nucleus | 40.37 | 41.92 |
| KRH15645 | Soybean | nucleus | 39.26 | 41.57 |
| CDY47737 | Canola | nucleus | 40.0 | 41.22 |
| Bra008113.1-P | Field mustard | nucleus | 40.0 | 41.22 |
| KRH05373 | Soybean | nucleus | 38.15 | 39.77 |
| GSMUA_Achr1P21010_001 | Banana | nucleus | 37.78 | 38.2 |
| GSMUA_Achr6P09740_001 | Banana | nucleus | 30.74 | 36.09 |
| Solyc04g007300.2.1 | Tomato | nucleus, plastid | 38.52 | 35.14 |
| GSMUA_Achr9P00560_001 | Banana | nucleus | 32.22 | 34.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.26 | 29.15 |
| Zm00001d019127_P001 | Maize | plastid | 17.78 | 15.69 |
Protein Annotations
| EnsemblPlants:Solyc03g119390.2.1 | EnsemblPlantsGene:Solyc03g119390.2 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF296 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI00027665CA | UniProt:K4BM88 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : |
Description
No Description!
Coordinates
chr3:+:68014579..68016210
Molecular Weight (calculated)
30729.3 Da
IEP (calculated)
5.770
GRAVY (calculated)
-0.689
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MADHQFNSDI QNFITNSPFS LLNFDSSVDL MNQFPDMMTI PCSSDMSSFN IQSSMEFSND NVFTQVNDQF PGSLQEIFQG NIQQESKNEE INDSKKRKIS
101: DTPESSSASA TGNKRRNTKG RGNRVKVDEK EEEKPREVVH VRAKRGQATD SHSLAERVRR GKINERLRCL QDIVPGCYKT MGMAGMLDEI INYVQSLQNQ
201: VEFLSMKLTA ASSYYDFNSE SDILVSLQRA KAYEALKMQK MMKKEIECEV MSTNQVGLHF GSYPMLPYNT
101: DTPESSSASA TGNKRRNTKG RGNRVKVDEK EEEKPREVVH VRAKRGQATD SHSLAERVRR GKINERLRCL QDIVPGCYKT MGMAGMLDEI INYVQSLQNQ
201: VEFLSMKLTA ASSYYDFNSE SDILVSLQRA KAYEALKMQK MMKKEIECEV MSTNQVGLHF GSYPMLPYNT
001: MANLSSDFQT FTMDDPIRQL AELSNTLHHF QTFPPPFSSS LDSLFFHNQF PDHFPGKSLE NNFHQGIFFP SNIQNNEESS SQFDTKKRKS LMEAVSTSEN
101: SVSDQTLSTS SAQVSINGNI STKNNSSRRG KRSKNREEEK EREVVHVRAR RGQATDSHSI AERVRRGKIN ERLKCLQDIV PGCYKTMGMA TMLDEIINYV
201: QSLQNQVEFL SMKLTAASSY YDFNSETDAV ESMQKAKARE AVEMGQGRDG SSVFHSSSWT L
101: SVSDQTLSTS SAQVSINGNI STKNNSSRRG KRSKNREEEK EREVVHVRAR RGQATDSHSI AERVRRGKIN ERLKCLQDIV PGCYKTMGMA TMLDEIINYV
201: QSLQNQVEFL SMKLTAASSY YDFNSETDAV ESMQKAKARE AVEMGQGRDG SSVFHSSSWT L
Arabidopsis Description
BEE3Transcription factor BEE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.