Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008113.1-P | Field mustard | nucleus | 99.24 | 99.24 |
| CDY45873 | Canola | nucleus | 54.2 | 71.36 |
| CDY67050 | Canola | nucleus | 67.56 | 67.56 |
| CDX73020 | Canola | nucleus | 66.79 | 66.79 |
| AT1G73830.1 | Thale cress | nucleus | 61.45 | 61.69 |
| CDX82053 | Canola | cytosol | 25.95 | 58.12 |
| CDY26165 | Canola | nucleus | 51.91 | 51.71 |
| CDY65027 | Canola | nucleus | 51.15 | 50.95 |
| KRH41647 | Soybean | nucleus | 39.69 | 41.27 |
| GSMUA_Achr10P... | Banana | nucleus | 30.15 | 40.93 |
| PGSC0003DMT400013766 | Potato | nucleus | 41.98 | 40.44 |
| KRH60345 | Soybean | nucleus | 37.79 | 40.24 |
| Solyc03g119390.2.1 | Tomato | nucleus | 41.22 | 40.0 |
| GSMUA_Achr11P... | Banana | nucleus | 26.72 | 39.55 |
| Solyc12g036470.1.1 | Tomato | nucleus | 40.84 | 39.34 |
| CDY36107 | Canola | nucleus | 32.82 | 38.39 |
| VIT_17s0000g03580.t01 | Wine grape | nucleus | 38.55 | 38.11 |
| PGSC0003DMT400014656 | Potato | nucleus | 39.69 | 37.68 |
| CDY24404 | Canola | nucleus | 32.06 | 37.5 |
| KRH39174 | Soybean | nucleus | 38.93 | 37.36 |
| KRH48495 | Soybean | nucleus | 38.55 | 37.13 |
| GSMUA_Achr1P21010_001 | Banana | nucleus | 37.02 | 36.33 |
| GSMUA_Achr9P00560_001 | Banana | nucleus | 33.97 | 35.18 |
| GSMUA_Achr6P09740_001 | Banana | nucleus | 30.53 | 34.78 |
| KRH15645 | Soybean | nucleus | 33.59 | 34.51 |
| KRH05373 | Soybean | nucleus | 32.44 | 32.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.92 | 29.89 |
| CDY30890 | Canola | mitochondrion | 14.12 | 19.07 |
| CDY42693 | Canola | nucleus | 20.23 | 18.93 |
| CDY24785 | Canola | nucleus | 21.37 | 18.67 |
| CDY29225 | Canola | nucleus | 23.28 | 17.63 |
| CDY30317 | Canola | nucleus | 20.99 | 16.62 |
| CDY25162 | Canola | nucleus | 20.61 | 16.02 |
| CDY46300 | Canola | nucleus | 20.61 | 16.02 |
| CDY53074 | Canola | nucleus | 20.23 | 15.82 |
| CDY51216 | Canola | nucleus | 19.85 | 15.66 |
| CDY20923 | Canola | nucleus | 20.23 | 15.54 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | GO:A0A078IC79 | UniProt:A0A078IC79 | EnsemblPlants:CDY47737 |
| ProteinID:CDY47737 | ProteinID:CDY47737.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00088013001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF296 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EDDDE1 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA02g16580DBnaA02g16580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IC79]
Coordinates
chrLK032732:-:75603..76891
Molecular Weight (calculated)
29298.1 Da
IEP (calculated)
7.786
GRAVY (calculated)
-0.735
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLSSDFQT FDPITQLAEL NNTLNHFQTM FASPFSSSLD SLFFHHQQHQ QFPEHFPGKS PENNGFHQGI LLPNYNTHNN DDSSSGIDTK KRKTLMESVS
101: TSENSVSDQT LSTSSAQVST NGTKNSSLRR GKMSKNREEE KERVVVHVRA KRGQATDSHS LAERVRRGKI NERLKCLKDI VPGCYKAMGM ATMLDEIINY
201: VQSLQNQVEF LSMKLTAASS YYDFNSEADA VDSMQKAKAR EAVEMGQGRD GSRVFHSSSS TL
101: TSENSVSDQT LSTSSAQVST NGTKNSSLRR GKMSKNREEE KERVVVHVRA KRGQATDSHS LAERVRRGKI NERLKCLKDI VPGCYKAMGM ATMLDEIINY
201: VQSLQNQVEF LSMKLTAASS YYDFNSEADA VDSMQKAKAR EAVEMGQGRD GSRVFHSSSS TL
001: MANLSSDFQT FTMDDPIRQL AELSNTLHHF QTFPPPFSSS LDSLFFHNQF PDHFPGKSLE NNFHQGIFFP SNIQNNEESS SQFDTKKRKS LMEAVSTSEN
101: SVSDQTLSTS SAQVSINGNI STKNNSSRRG KRSKNREEEK EREVVHVRAR RGQATDSHSI AERVRRGKIN ERLKCLQDIV PGCYKTMGMA TMLDEIINYV
201: QSLQNQVEFL SMKLTAASSY YDFNSETDAV ESMQKAKARE AVEMGQGRDG SSVFHSSSWT L
101: SVSDQTLSTS SAQVSINGNI STKNNSSRRG KRSKNREEEK EREVVHVRAR RGQATDSHSI AERVRRGKIN ERLKCLQDIV PGCYKTMGMA TMLDEIINYV
201: QSLQNQVEFL SMKLTAASSY YDFNSETDAV ESMQKAKARE AVEMGQGRDG SSVFHSSSWT L
Arabidopsis Description
BEE3Transcription factor BEE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWK7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.