CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39174	Soybean	nucleus	97.06	96.7
KRH15645	Soybean	nucleus	72.79	77.65
KRH05373	Soybean	nucleus	70.59	74.13
KRH60345	Soybean	nucleus	61.4	67.89
KRH41647	Soybean	nucleus	62.13	67.06
VIT_17s0000g03580.t01	Wine grape	nucleus	50.37	51.7
PGSC0003DMT400014656	Potato	nucleus	50.0	49.28
CDY45873	Canola	nucleus	35.66	48.74
CDX82053	Canola	cytosol	20.59	47.86
Bra025910.1-P	Field mustard	nucleus	42.65	46.77
GSMUA_Achr11P...	Banana	nucleus	29.78	45.76
GSMUA_Achr10P...	Banana	nucleus	32.35	45.6
Solyc03g119390.2.1	Tomato	nucleus	45.22	45.56
Solyc12g036470.1.1	Tomato	nucleus	45.22	45.22
AT1G73830.1	Thale cress	nucleus	43.38	45.21
PGSC0003DMT400013766	Potato	nucleus	44.85	44.85
CDY26165	Canola	nucleus	43.01	44.49
AT1G18400.1	Thale cress	nucleus	42.28	44.23
CDY65027	Canola	nucleus	42.65	44.11
CDX73020	Canola	nucleus	40.81	42.37
GSMUA_Achr1P21010_001	Banana	nucleus	41.18	41.95
CDY67050	Canola	nucleus	40.07	41.6
Bra015960.1-P	Field mustard	nucleus	40.07	41.6
GSMUA_Achr9P00560_001	Banana	nucleus	36.4	39.13
CDY47737	Canola	nucleus	37.13	38.55
Bra008113.1-P	Field mustard	nucleus	37.13	38.55
GSMUA_AchrUn_...	Banana	nucleus	37.13	37.27
KRH05195	Soybean	cytosol	12.13	37.08
GSMUA_Achr6P09740_001	Banana	nucleus	30.51	36.09

Protein Annotations

EntrezGene:100803700	MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EMBL:ACUP02004242	ncoils:Coil
EnsemblPlantsGene:GLYMA_07G092700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	UniProt:K7L0K7	EnsemblPlants:KRH48495	ProteinID:KRH48495	ProteinID:KRH48495.1
EMBL:KT031256	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF296	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002338655	InterPro:bHLH_dom	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:-:8659450..8661320

Molecular Weight (calculated)

30581.4 Da

IEP (calculated)

6.604

GRAVY (calculated)

-0.548

Length

272 amino acids

Sequence
(BLAST)

001: MAEFTENMQL QSNIRPSQFP FLEIDPSMEL LNQFLGMNQH VLENSNLIPM HNLVPFSCDT FLGPQEPECP GNLEENFPAH VNHNALPISL PIFQAENEIH
101: EGKKRKSMDL PETSSANSTP AVSESGSKIK HSSGRGKRVK SNVTEEEKAK EVVHVRARRG QATDSHSLAE RVRRGKINEK LRCLQNIVPG CYKTMGMAVM
201: LDEIINYVQS LQHQVEFLSL KLTAASTFYD FNSETDALET MQRARASEAK ELGKYKKEGY GGVSFFQPAW PL

Best Arabidopsis Sequence Match ( AT1G73830.1 )
(BLAST)

001: MANLSSDFQT FTMDDPIRQL AELSNTLHHF QTFPPPFSSS LDSLFFHNQF PDHFPGKSLE NNFHQGIFFP SNIQNNEESS SQFDTKKRKS LMEAVSTSEN
101: SVSDQTLSTS SAQVSINGNI STKNNSSRRG KRSKNREEEK EREVVHVRAR RGQATDSHSI AERVRRGKIN ERLKCLQDIV PGCYKTMGMA TMLDEIINYV
201: QSLQNQVEFL SMKLTAASSY YDFNSETDAV ESMQKAKARE AVEMGQGRDG SSVFHSSSWT L

Arabidopsis Description

BEE3Transcription factor BEE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWK7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.