Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30890 | Canola | mitochondrion | 39.33 | 18.04 |
| Zm00001d019127_P001 | Maize | plastid | 48.31 | 14.05 |
| KRH60345 | Soybean | nucleus | 38.2 | 13.82 |
| KRH41647 | Soybean | nucleus | 38.2 | 13.49 |
| KRH48495 | Soybean | nucleus | 37.08 | 12.13 |
| KRH39174 | Soybean | nucleus | 37.08 | 12.09 |
| KRH15645 | Soybean | nucleus | 29.21 | 10.2 |
| KRH05373 | Soybean | nucleus | 26.97 | 9.27 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | UniProt:A0A0R0FQW3 | EMBL:ACUP02010690 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_17G212900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH05195 | ProteinID:KRH05195 | ProteinID:KRH05195.1 | PFscan:PS50888 |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0006EE008C | InterPro:bHLH_dom |
Description
hypothetical protein
Coordinates
chr17:-:35278201..35278854
Molecular Weight (calculated)
10216.7 Da
IEP (calculated)
10.407
GRAVY (calculated)
-0.009
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MFVDAGQARR KKISERMKIL QDLFPGFNKV IGKSLVLDEI INYIQSLQRQ VEFLSMKLEV VNSRLNSGIE AFPPKDVSLK HPLLLTLNF
001: MDPSGMMNEG GPFNLAEIWQ FPLNGVSTAG DSSRRSFVGP NQFGDADLTT AANGDPARMS HALSQAVIEG ISGAWKRRED ESKSAKIVST IGASEGENKR
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EVMILMIINS IFSIFFTKQY MFLSRYSRGR SLDVYAVRSF KHCNKRSDLC FCSCSPKTEL KTTIFSQNMT CFCRYSRVGV
301: AISSSKHCNE PVTLCFYSYC LRKIYHFLLW NLKYKIQKSV LFS
101: QKIDEVCDGK AEAESLGTET EQKKQQMEPT KDYIHVRARR GQATDSHSLA ERARREKISE RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQRQVEFLS
201: MKLEAVNSRM NPGIEVFPPK EVMILMIINS IFSIFFTKQY MFLSRYSRGR SLDVYAVRSF KHCNKRSDLC FCSCSPKTEL KTTIFSQNMT CFCRYSRVGV
301: AISSSKHCNE PVTLCFYSYC LRKIYHFLLW NLKYKIQKSV LFS
Arabidopsis Description
BPETranscription factor BPE [Source:UniProtKB/Swiss-Prot;Acc:Q0JXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.