CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41647	Soybean	nucleus	79.27	77.38
KRH48495	Soybean	nucleus	67.89	61.4
KRH39174	Soybean	nucleus	67.48	60.81
KRH15645	Soybean	nucleus	55.69	53.73
KRH05373	Soybean	nucleus	54.06	51.35
CDY45873	Canola	nucleus	39.02	48.24
CDX82053	Canola	cytosol	22.76	47.86
VIT_17s0000g03580.t01	Wine grape	nucleus	50.0	46.42
GSMUA_Achr11P...	Banana	nucleus	32.52	45.2
CDX73020	Canola	nucleus	47.15	44.27
PGSC0003DMT400014656	Potato	nucleus	49.19	43.84
GSMUA_Achr10P...	Banana	nucleus	34.15	43.52
Bra015960.1-P	Field mustard	nucleus	46.34	43.51
CDY67050	Canola	nucleus	45.94	43.13
Solyc12g036470.1.1	Tomato	nucleus	47.56	43.01
Bra025910.1-P	Field mustard	nucleus	43.09	42.74
Solyc03g119390.2.1	Tomato	nucleus	46.75	42.59
AT1G73830.1	Thale cress	nucleus	45.12	42.53
PGSC0003DMT400013766	Potato	nucleus	46.34	41.91
AT1G18400.1	Thale cress	nucleus	43.9	41.54
CDY65027	Canola	nucleus	43.5	40.68
CDY26165	Canola	nucleus	43.5	40.68
KRH05195	Soybean	cytosol	13.82	38.2
CDY47737	Canola	nucleus	40.24	37.79
Bra008113.1-P	Field mustard	nucleus	39.84	37.4
GSMUA_Achr1P21010_001	Banana	nucleus	39.02	35.96
GSMUA_Achr9P00560_001	Banana	nucleus	36.59	35.57
GSMUA_Achr6P09740_001	Banana	nucleus	30.49	32.61
GSMUA_AchrUn_...	Banana	nucleus	34.55	31.37

Protein Annotations

EntrezGene:100810945	MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EMBL:ACUP02003363	ncoils:Coil
EnsemblPlantsGene:GLYMA_05G234500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
UniProt:I1K5R2	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KRH60345	ProteinID:KRH60345	ProteinID:KRH60345.1
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF296	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI000233A9E9	InterPro:bHLH_dom	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:41154749..41156676

Molecular Weight (calculated)

28079.4 Da

IEP (calculated)

5.239

GRAVY (calculated)

-0.552

Length

246 amino acids

Sequence
(BLAST)

001: MAEFTADLQS LRFPFLDIDN MEMQNLMMPF SCESFLGSPE AEFAGNLEEN FPDHNEVPVL VPIINSVKNE IHEGQKRKAT DIWEPSSANS TPAVFESGSK
101: TKNSCGRGKR VKRNMIEDKK PNEVVHVRAK RGQATDSHSL AERVRRGKIN EKLRCLQNIV PGCYKTMGMA IMLDEIINYV QSLQHQVEFL SMKLNAASTY
201: YDFNSESDVL ETMQRARASE VKELDRYVRE ECEGVSCFEP TWSWPL

Best Arabidopsis Sequence Match ( AT1G18400.1 )
(BLAST)

001: MANFENLSSD FQTIAMDIYS SITQAADLNN NNSNLHFQTF HPSSTSLESL FLHHHQQQLL HFPGNSPDSS NNFSSTSSFL HSDHNIVDET KKRKALLPTL
101: SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS
201: LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQRAKARETV EMGRQTRDGS PVFHLSTWSL

Arabidopsis Description

BEE1Transcription factor BEE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ13]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.