CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60345	Soybean	nucleus	77.38	79.27
KRH39174	Soybean	nucleus	67.46	62.27
KRH48495	Soybean	nucleus	67.06	62.13
KRH15645	Soybean	nucleus	61.11	60.39
KRH05373	Soybean	nucleus	61.51	59.85
CDY45873	Canola	nucleus	38.89	49.25
CDX82053	Canola	cytosol	22.62	48.72
VIT_17s0000g03580.t01	Wine grape	nucleus	49.6	47.17
GSMUA_Achr11P...	Banana	nucleus	31.75	45.2
Bra025910.1-P	Field mustard	nucleus	44.44	45.16
CDX73020	Canola	nucleus	46.43	44.66
Bra015960.1-P	Field mustard	nucleus	46.03	44.27
CDY67050	Canola	nucleus	46.03	44.27
GSMUA_Achr10P...	Banana	nucleus	33.73	44.04
AT1G18400.1	Thale cress	nucleus	44.84	43.46
Solyc12g036470.1.1	Tomato	nucleus	46.83	43.38
Solyc03g119390.2.1	Tomato	nucleus	46.43	43.33
CDY65027	Canola	nucleus	44.84	42.97
CDY26165	Canola	nucleus	44.84	42.97
AT1G73830.1	Thale cress	nucleus	44.44	42.91
PGSC0003DMT400014656	Potato	nucleus	46.43	42.39
PGSC0003DMT400013766	Potato	nucleus	44.84	41.54
CDY47737	Canola	nucleus	41.27	39.69
Bra008113.1-P	Field mustard	nucleus	41.27	39.69
KRH05195	Soybean	cytosol	13.49	38.2
GSMUA_Achr1P21010_001	Banana	nucleus	40.48	38.2
GSMUA_Achr9P00560_001	Banana	nucleus	33.73	33.6
GSMUA_Achr6P09740_001	Banana	nucleus	30.16	33.04
GSMUA_AchrUn_...	Banana	nucleus	33.33	31.0

Protein Annotations

EntrezGene:100777160	MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EMBL:ACUP02004776	EnsemblPlantsGene:GLYMA_08G042000
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	UniProt:K7L4X5	EnsemblPlants:KRH41647	ProteinID:KRH41647	ProteinID:KRH41647.1	PFAM:PF00010
PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF296	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00023389E5
InterPro:bHLH_dom	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:3326665..3328623

Molecular Weight (calculated)

28247.6 Da

IEP (calculated)

5.446

GRAVY (calculated)

-0.490

Length

252 amino acids

Sequence
(BLAST)

001: MAEFTADLQS LRFPFLDIDN MEIQNFMMPF SCESFLGSPE AEFPGNLLEE NFPALVQCVD HNEVPVLVPI GSVKNEIHEG QKRKATDICE PSSANSTPAV
101: SESGSKTKNS SGRGKRVKRN SIEDKKPNEV VHVRAKRGQA TDSHSLAERV RRGKINEKLR CLQNIVPGCY KTMGMAIMLD EIINYVQSLQ HQVEFLSMKL
201: TAASTYYDLN SESDALETMQ RARASEVKEL GKCVREGSEE VSCFEPTWPW PL

Best Arabidopsis Sequence Match ( AT1G73830.1 )
(BLAST)

001: MANLSSDFQT FTMDDPIRQL AELSNTLHHF QTFPPPFSSS LDSLFFHNQF PDHFPGKSLE NNFHQGIFFP SNIQNNEESS SQFDTKKRKS LMEAVSTSEN
101: SVSDQTLSTS SAQVSINGNI STKNNSSRRG KRSKNREEEK EREVVHVRAR RGQATDSHSI AERVRRGKIN ERLKCLQDIV PGCYKTMGMA TMLDEIINYV
201: QSLQNQVEFL SMKLTAASSY YDFNSETDAV ESMQKAKARE AVEMGQGRDG SSVFHSSSWT L

Arabidopsis Description

BEE3Transcription factor BEE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWK7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.