Factsheet for Bra015960.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67050	Canola	nucleus	98.86	98.86
CDX73020	Canola	nucleus	95.04	95.04
AT1G73830.1	Thale cress	nucleus	74.05	74.33
Bra008113.1-P	Field mustard	nucleus	67.56	67.56
Bra025910.1-P	Field mustard	nucleus	53.82	56.85
KRH60345	Soybean	nucleus	43.51	46.34
KRH41647	Soybean	nucleus	44.27	46.03
VIT_17s0000g03580.t01	Wine grape	nucleus	43.13	42.64
GSMUA_Achr10P...	Banana	nucleus	31.3	42.49
PGSC0003DMT400013766	Potato	nucleus	43.51	41.91
Solyc03g119390.2.1	Tomato	nucleus	43.13	41.85
PGSC0003DMT400014656	Potato	nucleus	43.89	41.67
Solyc12g036470.1.1	Tomato	nucleus	42.75	41.18
KRH39174	Soybean	nucleus	41.98	40.29
KRH48495	Soybean	nucleus	41.6	40.07
GSMUA_Achr11P...	Banana	nucleus	26.72	39.55
GSMUA_Achr1P21010_001	Banana	nucleus	40.08	39.33
KRH15645	Soybean	nucleus	37.02	38.04
Bra010993.1-P	Field mustard	nucleus	32.44	37.95
GSMUA_Achr6P09740_001	Banana	nucleus	32.82	37.39
KRH05373	Soybean	nucleus	35.5	35.91
GSMUA_Achr9P00560_001	Banana	nucleus	33.59	34.78
GSMUA_AchrUn_...	Banana	nucleus	33.21	32.1
Bra017765.1-P	Field mustard	cytosol, extracellular, nucleus, plastid	19.85	19.4
Bra010558.1-P	Field mustard	nucleus	20.23	17.67
Bra024474.1-P	Field mustard	nucleus	19.85	15.52
Bra039618.1-P	Field mustard	nucleus	19.85	15.43
Bra037226.1-P	Field mustard	nucleus	19.47	15.41
Zm00001d019127_P001	Maize	plastid	17.18	14.71

Protein Annotations

EnsemblPlants:Bra015960.1	EnsemblPlants:Bra015960.1-P	EnsemblPlantsGene:Bra015960	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR12565	PANTHER:PTHR12565:SF296	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002541DA0	UniProt:M4DHI3	MapMan:15.5.32	MapMan:26.1.2.1.2	:

Description

AT1G73830 (E=2e-107) BEE3 | BEE3 (BR ENHANCED EXPRESSION 3); DNA binding / transcription factor

Coordinates

chrA07:+:20046895..20048206

Molecular Weight (calculated)

29392.5 Da

IEP (calculated)

7.808

GRAVY (calculated)

-0.679

Length

262 amino acids

Sequence
(BLAST)

001: MANLSSDLQT YTVDDPITQL AELNNTLHQF QTMFAPPFSS SLDSLLFHHH QHQPLPDHFL GKSPENNFHQ GVFIPSNIHN KNDDSSLDSK KRKTLMASMS
101: TSENSVSDQT SSAQVSINGN VLTKNNSSRR GKRLKNIEDK KEREVVHVRA KRGQATDSHS LAERVRRGKI NERLKCLQDI VPGCYKAMGM ATMLDEIINY
201: VQSLQNQVEF LSMKLTAASS YYDFNSEADA VDSMQKAKAR EAVEMGQGRD GNTVFHSSSW TL

Best Arabidopsis Sequence Match ( AT1G73830.1 )
(BLAST)

001: MANLSSDFQT FTMDDPIRQL AELSNTLHHF QTFPPPFSSS LDSLFFHNQF PDHFPGKSLE NNFHQGIFFP SNIQNNEESS SQFDTKKRKS LMEAVSTSEN
101: SVSDQTLSTS SAQVSINGNI STKNNSSRRG KRSKNREEEK EREVVHVRAR RGQATDSHSI AERVRRGKIN ERLKCLQDIV PGCYKTMGMA TMLDEIINYV
201: QSLQNQVEFL SMKLTAASSY YDFNSETDAV ESMQKAKARE AVEMGQGRDG SSVFHSSSWT L

Arabidopsis Description

BEE3Transcription factor BEE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWK7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.