Factsheet for Bra010558.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000276.1-P
Bra004712.1-P
Bra004740.1-P
Bra016854.1-P
Bra024474.1-P
Bra037226.1-P
Bra037738.1-P
Bra039618.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36540.1	Bra024474.1-P	AT2G18300.3	23221598
AT4G36540.1	Bra037226.1-P	AT2G18300.3	23221598
AT4G36540.1	Bra039618.1-P	AT2G18300.3	23221598
AT4G36540.1	Bra000276.1-P	AT2G42870.1	21798944
AT4G36540.1	Bra004712.1-P	AT2G42870.1	21798944
AT4G36540.1	Bra016854.1-P	AT2G42870.1	21798944
AT4G36540.1	Bra004740.1-P	AT2G43060.1	21798944
AT4G36540.1	Bra037738.1-P	AT2G43060.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53074	Canola	nucleus	92.67	82.99
AT4G36540.1	Thale cress	nucleus	52.67	51.97
Bra039618.1-P	Field mustard	nucleus	51.0	45.4
Bra024474.1-P	Field mustard	nucleus	48.33	43.28
Bra037226.1-P	Field mustard	nucleus	47.67	43.2
Bra017765.1-P	Field mustard	cytosol, extracellular, nucleus, plastid	36.33	40.67
HORVU6Hr1G016250.1	Barley	nucleus	10.33	33.7
HORVU7Hr1G043560.1	Barley	nucleus	11.0	33.67
HORVU3Hr1G030720.2	Barley	cytosol, nucleus, vacuole	13.33	31.75
Bra025910.1-P	Field mustard	nucleus	18.0	21.77
Bra010993.1-P	Field mustard	nucleus	16.0	21.43
Bra008113.1-P	Field mustard	nucleus	17.67	20.23
Bra015960.1-P	Field mustard	nucleus	17.67	20.23
Zm00001d019127_P001	Maize	plastid	18.67	18.3
HORVU6Hr1G037110.1	Barley	plastid	15.0	14.56
HORVU3Hr1G066050.1	Barley	nucleus	15.67	13.17

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EnsemblPlantsGene:Bra010558	EnsemblPlants:Bra010558.1	EnsemblPlants:Bra010558.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	UniProt:M4D258	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF184
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0002546007	InterPro:bHLH_dom	SEG:seg	:

Description

AT4G36540 (E=3e-113) BEE2 | BEE2 (BR Enhanced Expression 2); DNA binding / transcription factor

Coordinates

chrA08:+:15165913..15167180

Molecular Weight (calculated)

34562.5 Da

IEP (calculated)

6.636

GRAVY (calculated)

-0.893

Length

300 amino acids

Sequence
(BLAST)

001: MDLSVLERVK WLQQQQMVSP EFFEILGSDG REELKRVESY LGNNNDEWQS FRHYETIDGC ISRTSSFQME QVKNNEENRA TALQHKRKTE GKTEKIENKK
101: NKKIKTEDET ESSMKGKSNM SNSETSSEIQ KRDYIHVRAR RGEATDRHSL AERARREKLS KKMKCLQDIV PGCNKVTGKA GMLDEIINYV QSLQQQVEFL
201: SMKLSVLNPE LDYHINELST KQFQACFTDL PEAVSKQSMM VDASSFPLQH QESLDYSVIN SIQTTTLGSK DQTSSGWEIH SQSLYNNLRT DSDSSFFSLK

Best Arabidopsis Sequence Match ( AT4G36540.1 )
(BLAST)

001: MDLSVLDRLK WLQQQQMVSP EFLQILGSDG REELKRVESY LGNNNDELQS FRHFPEFGPD YDTTDGCISR TSSFHMEPVK NNGHSRAITL QNKRKPEGKT
101: EKREKKKIKA EDETEPSMKG KSNMSNTETS SEIQKPDYIH VRARRGEATD RHSLAERARR EKISKKMKCL QDIVPGCNKV TGKAGMLDEI INYVQSLQQQ
201: VEFLSMKLSV INPELECHID DLSAKQFQAY FTGPPEGDSK QSIMADFRSF PLHQQGSLDY SVINSDHTTS LGAKDHTSSS WETHSQCLYN SLRTDSVSNF
301: FSLK

Arabidopsis Description

BEE2Transcription factor BEE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VJ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.