Factsheet for HORVU7Hr1G043560.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G111110.2
HORVU3Hr1G030720.2
HORVU3Hr1G066050.1
HORVU4Hr1G060500.11
HORVU6Hr1G016250.1
HORVU6Hr1G037110.1
HORVU7Hr1G043560.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18300.3	HORVU3Hr1G030720.2	AT2G18300.3	23221598
AT2G18300.3	HORVU3Hr1G066050.1	AT2G18300.3	23221598
AT2G18300.3	HORVU6Hr1G016250.1	AT2G18300.3	23221598
AT2G18300.3	HORVU6Hr1G037110.1	AT2G18300.3	23221598
AT2G18300.3	HORVU7Hr1G043560.1	AT2G18300.3	23221598
AT4G36540.1	HORVU3Hr1G030720.2	AT2G18300.3	23221598
AT4G36540.1	HORVU3Hr1G066050.1	AT2G18300.3	23221598
AT4G36540.1	HORVU6Hr1G016250.1	AT2G18300.3	23221598
AT4G36540.1	HORVU6Hr1G037110.1	AT2G18300.3	23221598
AT4G36540.1	HORVU7Hr1G043560.1	AT2G18300.3	23221598
AT4G36540.1	HORVU2Hr1G111110.2	AT2G43060.1	21798944
AT4G36540.1	HORVU4Hr1G060500.11	AT5G59210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G030720.2	Barley	cytosol, nucleus, vacuole	82.65	64.29
HORVU6Hr1G016250.1	Barley	nucleus	55.1	58.7
HORVU6Hr1G037110.1	Barley	plastid	68.37	21.68
HORVU3Hr1G066050.1	Barley	nucleus	51.02	14.01
Bra017765.1-P	Field mustard	cytosol, extracellular, nucleus, plastid	36.73	13.43
Bra037226.1-P	Field mustard	nucleus	40.82	12.08
Bra039618.1-P	Field mustard	nucleus	40.82	11.87
CDY42693	Canola	nucleus	33.67	11.79
CDY30317	Canola	nucleus	39.8	11.78
CDY25162	Canola	nucleus	39.8	11.57
CDY46300	Canola	nucleus	39.8	11.57
CDY51216	Canola	nucleus	38.78	11.45
CDY20923	Canola	nucleus	38.78	11.14
Bra010558.1-P	Field mustard	nucleus	33.67	11.0
Bra024474.1-P	Field mustard	nucleus	36.73	10.75
CDY24785	Canola	nucleus	32.65	10.67
CDY29225	Canola	nucleus	36.73	10.4
CDY53074	Canola	nucleus	34.69	10.15
AT4G36540.1	Thale cress	nucleus	30.61	9.87
AT2G18300.3	Thale cress	nucleus	35.71	9.62
Zm00001d019127_P001	Maize	plastid	12.24	3.92

Protein Annotations

EnsemblPlants:HORVU7Hr1G043560.1	EnsemblPlantsGene:HORVU7Hr1G043560	ncoils:Coil	PANTHER:PTHR12565	PANTHER:PTHR12565:SF184	SEG:seg
UniParc:UPI000B480B73	UniProt:A0A287W9W5	MapMan:15.5.32	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:133025829..133026377

Molecular Weight (calculated)

10702.7 Da

IEP (calculated)

10.379

GRAVY (calculated)

-1.151

Length

98 amino acids

Sequence
(BLAST)

1: MVEATGPDSK KCKIEDETVR PKVEEEAATA SDGSAGGERG RKQAKGKGSK SKQPAADEPP RDYVHVRARR GQATDSHSLA GRVRREKITL KMKMLQDL

Best Arabidopsis Sequence Match ( AT5G50915.1 )
(BLAST)

001: MATFSYFQNY PHSLLDPLLF PTPHSSINLT SFIDQNHLYP LPNISTVEDI SFLEYNVDKT ENSGSEKLAN TTKTATTGSS SCDQLSHGPS AITNTGKTRG
101: RKARNSNNSK EGVEGRKSKK QKRGSKEEPP TDYIHVRARR GQATDSHSLA ERVRREKISE RMRTLQNLVP GCDKVTGKAL MLDEIINYVQ TLQTQVEFLS
201: MKLTSISPVV YDFGSDLDGL ILQSEMGSPE VGTSFTNAMP TTTPIFPSLL DNSVVPTHAQ VQEEGEEREN FVDRSGFNNN NFCSFP

Arabidopsis Description

BHLH137Transcription factor bHLH137 [Source:UniProtKB/Swiss-Prot;Acc:Q93W88]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.