Factsheet for Bra017765.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
plastid 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000276.1-P
Bra004712.1-P
Bra004740.1-P
Bra016854.1-P
Bra024474.1-P
Bra037226.1-P
Bra037738.1-P
Bra039618.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36540.1	Bra024474.1-P	AT2G18300.3	23221598
AT4G36540.1	Bra037226.1-P	AT2G18300.3	23221598
AT4G36540.1	Bra039618.1-P	AT2G18300.3	23221598
AT4G36540.1	Bra000276.1-P	AT2G42870.1	21798944
AT4G36540.1	Bra004712.1-P	AT2G42870.1	21798944
AT4G36540.1	Bra016854.1-P	AT2G42870.1	21798944
AT4G36540.1	Bra004740.1-P	AT2G43060.1	21798944
AT4G36540.1	Bra037738.1-P	AT2G43060.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G043560.1	Barley	nucleus	13.43	36.73
Bra010558.1-P	Field mustard	nucleus	40.67	36.33
CDY53074	Canola	nucleus	42.16	33.73
HORVU6Hr1G016250.1	Barley	nucleus	11.57	33.7
HORVU3Hr1G030720.2	Barley	cytosol, nucleus, vacuole	14.55	30.95
AT4G36540.1	Thale cress	nucleus	33.96	29.93
Bra037226.1-P	Field mustard	nucleus	31.72	25.68
Bra039618.1-P	Field mustard	nucleus	31.72	25.22
Bra024474.1-P	Field mustard	nucleus	30.97	24.78
Bra025910.1-P	Field mustard	nucleus	20.15	21.77
Bra010993.1-P	Field mustard	nucleus	17.91	21.43
Bra015960.1-P	Field mustard	nucleus	19.4	19.85
Bra008113.1-P	Field mustard	nucleus	18.66	19.08
Zm00001d019127_P001	Maize	plastid	21.27	18.63
HORVU6Hr1G037110.1	Barley	plastid	13.43	11.65
HORVU3Hr1G066050.1	Barley	nucleus	14.93	11.2

Protein Annotations

EnsemblPlants:Bra017765.1	EnsemblPlants:Bra017765.1-P	EnsemblPlantsGene:Bra017765	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR12565	PANTHER:PTHR12565:SF184	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002540C4E	UniProt:M4DMN0	MapMan:15.5.32	MapMan:26.1.2.1.2	:

Description

AT4G36540 (E=3e-050) BEE2 | BEE2 (BR Enhanced Expression 2); DNA binding / transcription factor

Coordinates

chrA03:+:30316233..30317530

Molecular Weight (calculated)

30157.2 Da

IEP (calculated)

8.963

GRAVY (calculated)

-0.328

Length

268 amino acids

Sequence
(BLAST)

001: MSQSQSSIPS QSTIMDVGSS ITGKRETREK KKKIKAEDET ESSMKGNSNM SNTETSSDVL KQDYIHVRAR RGEATDRHSL AERARREKIS KKMKCLQDIV
101: PGCNKVTGKA GMLDEIINYV QSLQQQVEFL SMKLSFLNPQ LEFHINELSS MMADPRSFPL HRQGSLDYSV LNSNQTTSLN ALVIIFSLAT NLSFLVSCPS
201: SNLFIFFFPA ENGDIFNLGC SLTVSLQQLE NRFSFQFLQP QVKKLGIRVI ENSANFYLSG HSLCYLKI

Best Arabidopsis Sequence Match ( AT4G36540.2 )
(BLAST)

001: MDLSVLDRLK WLQQQQMVSP EFLQILGSDG REELKRVESY LGNNNDELQS FRHFPEFGPD YDTTDGCISR TSSFHMEPVK NNGHSRAITL QNKRKPEGKT
101: EKREKKKIKA EDETEPSMKG KSNMSNTETS SEIQKPDYIH VRARRGEATD RHSLAERARR EKISKKMKCL QDIVPGCNKV TGKAGMLDEI INYVQSLQQQ
201: VEFLSMKLSV INPELECHID DLSAKQAYFT GPPEGDSKQS IMADFRSFPL HQQGSLDYSV INSDHTTSLG AKDHTSSSWE THSQCLYNSL RTDSVSNFFS
301: LK

Arabidopsis Description

BEE2Transcription factor BEE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VJ4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.