Factsheet for AT4G36540.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24785	Canola	nucleus	61.18	62.0
CDY42693	Canola	nucleus	49.67	53.93
Bra010558.1-P	Field mustard	nucleus	51.97	52.67
CDY53074	Canola	nucleus	54.28	49.25
AT2G18300.3	Thale cress	nucleus	45.39	37.91
Bra017765.1-P	Field mustard	cytosol, extracellular, nucleus, plastid	29.93	33.96
HORVU7Hr1G043560.1	Barley	nucleus	9.87	30.61
HORVU6Hr1G016250.1	Barley	nucleus	8.88	29.35
HORVU3Hr1G030720.2	Barley	cytosol, nucleus, vacuole	10.53	25.4
AT1G73830.1	Thale cress	nucleus	20.07	23.37
AT1G25330.1	Thale cress	nucleus	15.46	21.08
AT1G18400.1	Thale cress	nucleus	17.43	20.38
Zm00001d019127_P001	Maize	plastid	18.09	17.97
HORVU3Hr1G066050.1	Barley	nucleus	14.47	12.32
HORVU6Hr1G037110.1	Barley	plastid	12.5	12.3

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EntrezGene:829806	UniProt:A0A178URK0	ProteinID:AEE86669.1
ProteinID:AEE86670.1	EMBL:AF370231	EMBL:AF488591	ArrayExpress:AT4G36540	EnsemblPlantsGene:AT4G36540	RefSeq:AT4G36540
TAIR:AT4G36540	RefSeq:AT4G36540-TAIR-G	EnsemblPlants:AT4G36540.1	TAIR:AT4G36540.1	EMBL:AY054588	EMBL:AY059122
EMBL:AY084997	EMBL:AY138254	Unigene:At.25403	Symbol:BEE2	EMBL:BT000388	ProteinID:CAB16839.1
ProteinID:CAB80320.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	RefSeq:NP_195372.1	RefSeq:NP_849508.1
ProteinID:OAO96549.1	PFAM:PF00010	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF184	UniProt:Q93VJ4	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000009C800	InterPro:bHLH_dom	SEG:seg	:	:

Description

BEE2Transcription factor BEE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93VJ4]

Coordinates

chr4:+:17243583..17245296

Molecular Weight (calculated)

34675.7 Da

IEP (calculated)

7.057

GRAVY (calculated)

-0.867

Length

304 amino acids

Sequence
(BLAST)

001: MDLSVLDRLK WLQQQQMVSP EFLQILGSDG REELKRVESY LGNNNDELQS FRHFPEFGPD YDTTDGCISR TSSFHMEPVK NNGHSRAITL QNKRKPEGKT
101: EKREKKKIKA EDETEPSMKG KSNMSNTETS SEIQKPDYIH VRARRGEATD RHSLAERARR EKISKKMKCL QDIVPGCNKV TGKAGMLDEI INYVQSLQQQ
201: VEFLSMKLSV INPELECHID DLSAKQFQAY FTGPPEGDSK QSIMADFRSF PLHQQGSLDY SVINSDHTTS LGAKDHTSSS WETHSQCLYN SLRTDSVSNF
301: FSLK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.