Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26165 | Canola | nucleus | 70.0 | 69.2 |
| CDY65027 | Canola | nucleus | 69.23 | 68.44 |
| Bra025910.1-P | Field mustard | nucleus | 64.62 | 67.74 |
| AT1G73830.1 | Thale cress | nucleus | 55.0 | 54.79 |
| GSMUA_Achr10P... | Banana | nucleus | 34.23 | 46.11 |
| KRH41647 | Soybean | nucleus | 43.46 | 44.84 |
| KRH60345 | Soybean | nucleus | 41.54 | 43.9 |
| GSMUA_Achr11P... | Banana | nucleus | 28.85 | 42.37 |
| KRH48495 | Soybean | nucleus | 44.23 | 42.28 |
| KRH39174 | Soybean | nucleus | 44.23 | 42.12 |
| PGSC0003DMT400014656 | Potato | nucleus | 44.23 | 41.67 |
| VIT_17s0000g03580.t01 | Wine grape | nucleus | 42.31 | 41.51 |
| Solyc12g036470.1.1 | Tomato | nucleus | 42.69 | 40.81 |
| PGSC0003DMT400013766 | Potato | nucleus | 42.31 | 40.44 |
| Solyc03g119390.2.1 | Tomato | nucleus | 41.92 | 40.37 |
| KRH15645 | Soybean | nucleus | 39.23 | 40.0 |
| KRH05373 | Soybean | nucleus | 38.08 | 38.22 |
| AT1G25330.1 | Thale cress | nucleus | 32.69 | 38.12 |
| GSMUA_Achr1P21010_001 | Banana | nucleus | 37.69 | 36.7 |
| GSMUA_Achr6P09740_001 | Banana | nucleus | 29.62 | 33.48 |
| GSMUA_Achr9P00560_001 | Banana | nucleus | 32.31 | 33.2 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.69 | 31.37 |
| AT4G36540.1 | Thale cress | nucleus | 20.38 | 17.43 |
| AT2G18300.3 | Thale cress | nucleus | 23.46 | 16.76 |
| Zm00001d019127_P001 | Maize | plastid | 16.54 | 14.05 |
Protein Annotations
| MapMan:15.5.32 | MapMan:26.1.2.1.2 | Gene3D:4.10.280.10 | EntrezGene:838421 | ProteinID:AAF25996.1 | ProteinID:AEE29711.1 |
| EMBL:AF488579 | EMBL:AK117269 | ArrayExpress:AT1G18400 | EnsemblPlantsGene:AT1G18400 | RefSeq:AT1G18400 | TAIR:AT1G18400 |
| RefSeq:AT1G18400-TAIR-G | EnsemblPlants:AT1G18400.1 | TAIR:AT1G18400.1 | EMBL:AY138253 | Symbol:BEE1 | EMBL:BT005268 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 |
| GO:GO:0009987 | GO:GO:0046983 | GO:GO:1902448 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| RefSeq:NP_173276.2 | PFAM:PF00010 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF296 | UniProt:Q8GZ13 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000000C5B9 | InterPro:bHLH_dom | SEG:seg | : |
Description
BEE1Transcription factor BEE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ13]
Coordinates
chr1:+:6331398..6333856
Molecular Weight (calculated)
29365.3 Da
IEP (calculated)
6.919
GRAVY (calculated)
-0.692
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MANFENLSSD FQTIAMDIYS SITQAADLNN NNSNLHFQTF HPSSTSLESL FLHHHQQQLL HFPGNSPDSS NNFSSTSSFL HSDHNIVDET KKRKALLPTL
101: SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS
201: LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQRAKARETV EMGRQTRDGS PVFHLSTWSL
101: SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS
201: LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQRAKARETV EMGRQTRDGS PVFHLSTWSL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.