Factsheet for Solyc12g036470.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013766	Potato	nucleus	82.35	82.35
Solyc03g119390.2.1	Tomato	nucleus	51.84	52.22
CDX82053	Canola	cytosol	21.32	49.57
CDY45873	Canola	nucleus	35.66	48.74
Bra025910.1-P	Field mustard	nucleus	43.38	47.58
KRH60345	Soybean	nucleus	43.01	47.56
KRH41647	Soybean	nucleus	43.38	46.83
VIT_17s0000g03580.t01	Wine grape	nucleus	45.22	46.42
CDY26165	Canola	nucleus	43.75	45.25
KRH48495	Soybean	nucleus	45.22	45.22
KRH39174	Soybean	nucleus	45.22	45.05
GSMUA_Achr10P...	Banana	nucleus	31.62	44.56
CDY65027	Canola	nucleus	43.01	44.49
AT1G73830.1	Thale cress	nucleus	41.91	43.68
CDX73020	Canola	nucleus	41.54	43.13
CDY67050	Canola	nucleus	41.18	42.75
Bra015960.1-P	Field mustard	nucleus	41.18	42.75
AT1G18400.1	Thale cress	nucleus	40.81	42.69
CDY47737	Canola	nucleus	39.34	40.84
Bra008113.1-P	Field mustard	nucleus	39.34	40.84
KRH15645	Soybean	nucleus	38.24	40.78
GSMUA_Achr11P...	Banana	nucleus	26.47	40.68
KRH05373	Soybean	nucleus	37.13	39.0
GSMUA_Achr6P09740_001	Banana	nucleus	31.25	36.96
GSMUA_Achr1P21010_001	Banana	nucleus	34.93	35.58
Solyc04g007300.2.1	Tomato	nucleus, plastid	36.76	33.78
GSMUA_Achr9P00560_001	Banana	nucleus	30.88	33.2
GSMUA_AchrUn_...	Banana	nucleus	29.41	29.52
Zm00001d019127_P001	Maize	plastid	18.01	16.01

Protein Annotations

EnsemblPlants:Solyc12g036470.1.1	EnsemblPlantsGene:Solyc12g036470.1	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	PANTHER:PTHR12565
PANTHER:PTHR12565:SF296	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI000276A1A5	UniProt:K4DEA4	MapMan:15.5.32	MapMan:26.1.2.1.2	:	:

Description

Transcription factor BEE 3 [Source:Projected from Arabidopsis thaliana (AT1G73830) UniProtKB/Swiss-Prot;Acc:Q8GWK7]

Coordinates

chr12:-:51995488..51997725

Molecular Weight (calculated)

31343.1 Da

IEP (calculated)

8.305

GRAVY (calculated)

-0.778

Length

272 amino acids

Sequence
(BLAST)

001: MAHHYFNPDM QIIIPPSSVF NTDTNLNFHN QFPEQNYLNT ISLEMSNFNF HKHSDEHILN QTSDFPVYLT ENFQQDMFNL PVPTRNDINE SKKRKTIETP
101: ESSSAYSSPA VSSRRKTGKG RGKRVKRDEN EEEKLRQVVH VRAKRGQATD SHSLAERVRR GKINERLRCL QDIVPGCYKS MGMAVMLDEI INYVQSLQNQ
201: VEFLSMKLSA ASTYYDFNSE TDILETMQRA KAYEANMMQK LKKEGCEGMG SNQVGPLIDR TFGCYPKLSY NT

Best Arabidopsis Sequence Match ( AT1G18400.1 )
(BLAST)

001: MANFENLSSD FQTIAMDIYS SITQAADLNN NNSNLHFQTF HPSSTSLESL FLHHHQQQLL HFPGNSPDSS NNFSSTSSFL HSDHNIVDET KKRKALLPTL
101: SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS
201: LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQRAKARETV EMGRQTRDGS PVFHLSTWSL

Arabidopsis Description

BEE1Transcription factor BEE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ13]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.